Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3124g00021 ATGCCGACCGTGGCGGTGAAACTCTACAGCGTCTTCTTTAAGTTTCTCCTAAAGAACCGTTTGCAGAACCAGATCCATGCCCCGTCCGAAGAATCCAACCAGTTCGGTGTTACGACCCGACCCGACGAGTCCGTCGCCGCCGCCAACCCCTCCTTCTCCGACGGCATCGCCACCAAAGATATCCACATCGATCCCGTGACCTCCCTCTCCGTCCGAATCTTCCTCCCCGATTCCGCACTCTCTCCCGAACCCAAATCCAAAACTATCTACAAATCCGAACCTGGATCCGCGGGGAACCTTGAAACGGCGTCGTCGCGCGCGGTGCGGCGAAATAGCTACGAGCCCTCAGTGTTTACGCCGCGGGAGGAGACGAGGCGGAGCAGCGCCGGGGAGTACCGGGGGTACTTGCCGGCGGCGGACGGTCGCCGGAAAAAGTTACCGGTGGTGTTACAGTTCCACGGCGGGGGGTGGGTGAGCGGGAGCAATGATTCGGTAGCGAACGATATGTTCTGCCGGAGGATTGCGAAGCTCTGCGACGCGGTGGTGGTGGCGGTCGGCTACCGGCTGGCGCCGGAGAATCGGTTCCCGGCGGCGTTTGAGGACGGGGTGAAGGTGCTGAATTGGCTGGCGAAGCAGGCAAATTTGGCGGAGTGTAGTAAGTCGTTGGGAGGGAGGAAATTTGAGGGTCATCACAAGCATATTGTTGATTCTTTTGGAGCGTCAGTAGTTGAACCTTGGTTGGCTGCTCATGCAAATCCATCTAGATGTGTTCTTCTTGGTGTGAGTTGTGGTGCAAATATTGCAGACTATGTGGCTCGGAAAGCTGTAGAAGCAGGTTCACTTCTGGACCCGGTCAAGGTGGTGGCACAGGTCCTGATGTATCCATTTTTTATTGGAAGTGTGCCCACTCATTCTGAAATAAAGTTGGCAAACTCTTACTTTTATGACAAGGCCATGTGTATGCTAGCATGGAAACTATTTCTACCAGAGGGGGAGTTTAGCCTAGACCATCCAGCTGCCAATCCCCTTGTCCCAGGCCAGGGACCTCCTTTAAAGCAGAGACCTCCAACATTGACAGTGGTGGCAGAACACGACTGGATGAGGGACCGTGCCATTGCATATTCAGAGGAGCTTAGGAAGGTGAATGTTGATGCACCTGTTTATGAGTATAAAGATGCAGTCCATGAATTTGCAACACTTGACATCCTTATCAAAAGCCCTCAGGCCCAGGTCTCAGTATTGGAAGCACTTTGA 1254 0.5407 MPTVAVKLYSVFFKFLLKNRLQNQIHAPSEESNQFGVTTRPDESVAAANPSFSDGIATKDIHIDPVTSLSVRIFLPDSALSPEPKSKTIYKSEPGSAGNLETASSRAVRRNSYEPSVFTPREETRRSSAGEYRGYLPAADGRRKKLPVVLQFHGGGWVSGSNDSVANDMFCRRIAKLCDAVVVAVGYRLAPENRFPAAFEDGVKVLNWLAKQANLAECSKSLGGRKFEGHHKHIVDSFGASVVEPWLAAHANPSRCVLLGVSCGANIADYVARKAVEAGSLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEGEFSLDHPAANPLVPGQGPPLKQRPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVYEYKDAVHEFATLDILIKSPQAQVSVLEAL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3124g00021 417 MobiDBLite consensus disorder prediction 31 46 - -
Vium3124g00021 417 Gene3D alpha/beta hydrolase 15 417 IPR029058 -
Vium3124g00021 417 MobiDBLite consensus disorder prediction 31 51 - -
Vium3124g00021 417 MobiDBLite consensus disorder prediction 82 130 - -
Vium3124g00021 417 Pfam alpha/beta hydrolase fold 149 398 IPR013094 GO:0016787
Vium3124g00021 417 SUPERFAMILY alpha/beta-Hydrolases 113 409 IPR029058 -
Vium3124g00021 417 MobiDBLite consensus disorder prediction 92 112 - -
Vium3124g00021 417 PANTHER ARYLACETAMIDE DEACETYLASE 53 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3124g00021 Vium-Chr3124 211698 217373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3124g00021 1 410 Carbohydrate Esterase AT3G27320 71.496 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3124g00021 - - gmx:100809142 699.123