Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3124g00002 ATGATTGAAAATAACTGTAATCACCCACTACTCCCATTTCTCGTCCAACTCACTCAAAACCAACTTCGCCACTCTCTCGATCTACATCTATATATAAGAAACCCTTTGTTCCACATTTCCTACTACACCAAAGTGTGCTATTTCTACCACAAACTTCTGCATTCACTCTCCTATTGCCTCATACTATCAATGGCTACTTCTTGTTCCACTTCCCTATTAGTGTTTCTCTTTGCCATTTTTTCCACTCTTACATGTTGCTCTGTGGCTTCCAATGAATTCCAAGTTGGTGACTCAAATGGGTGGGCTGTCCCTCCCCAAAATGACACCAACTTCTACAATGAATGGGCTTCCCACAACAGGTTCCACGCTGGTGACACCCTCTGGTTTAAGTACAAGAAGGATTCAGTGATGGAGGTGGATGAGGGGGATTACACACACTGCAATGCCACACACCCCAAACTCTTCTCCAACAGTGGCAACACCAAGTTGAAGCTTGGCCACCCAGGGACCTTCTACTTCATGAGCGGTGCTTCAGGGCACTGTGAGGTGGGACAGAAGATGATTGTGAGGGTCATGGTGGATGAGTCTCTTCCTCAACATGCCAAGTCTTCTAGCTACCATATTGCAATTTCTCCAACTGGGCTGTCTCAAGTGCTCTTCTTTCAGTTTCTTTTGGCATCTTTCTTAGGTAGTTTGAGTAATTAG 705 0.4496 MIENNCNHPLLPFLVQLTQNQLRHSLDLHLYIRNPLFHISYYTKVCYFYHKLLHSLSYCLILSMATSCSTSLLVFLFAIFSTLTCCSVASNEFQVGDSNGWAVPPQNDTNFYNEWASHNRFHAGDTLWFKYKKDSVMEVDEGDYTHCNATHPKLFSNSGNTKLKLGHPGTFYFMSGASGHCEVGQKMIVRVMVDESLPQHAKSSSYHIAISPTGLSQVLFFQFLLASFLGSLSN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3124g00002 234 PANTHER BLUE COPPER PROTEIN 82 199 IPR039391 GO:0009055
Vium3124g00002 234 SUPERFAMILY Cupredoxins 91 192 IPR008972 -
Vium3124g00002 234 FunFam Early nodulin-like protein 1 90 196 - -
Vium3124g00002 234 Gene3D - 89 196 IPR008972 -
Vium3124g00002 234 ProSiteProfiles Phytocyanin domain profile. 91 193 IPR003245 GO:0009055
Vium3124g00002 234 CDD OsENODL1_like 92 192 IPR041846 -
Vium3124g00002 234 Pfam Plastocyanin-like domain 107 185 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3124g00002 Vium-Chr3124 4357 5702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3124g00002 72 192 Phytocyanin Superfamily AT3G18590 53.279 8.64e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3124g00002 - - vra:106766138 471.855