Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3104g00039 ATGAAGAAAATTTCCAAGAGCAGCTGCAAGTCCGCATCACACAGGCTCTTTAAAGACAAGGCAAGAAACCATGTTGATGATCTACAGGTCATGTTCTTGGATCTGCAGTTTGCCAGAAAGGAGAGCCGAACGATTGATGTGGCACTCCTTGAGGAGCAACTCCATCAAATGCTTCGTGAGTGGAAGGCCGAGCTCAATGAGCCTTCTCCAGCTTCTTCTCTGCAACAAGGTGGTAGTCTTGGTTCATTCTCGACCGATGTCTATAGGCTATTGCAGCTCTGTGAGGAGGAAGATGATGCCACTAGTCCATTAGTTGCACCTAAGCCTGAACCTAATGATCAGACTATGCAGCCTGGAGCTAGGGTGATAGTTCAAGAGGGCCAGCATGAACAAGAATTTCTATTACTTAAAGAATGCAAACACTCCGCAGTAGGAGTTCCCAACATGGAAGCTAACAACTTGGACGGACCTGCTTTAGAACTTCATCAATTTGAATTCAATAAGGACTTGGATCACAGCTTTTATGCCGGTACAGGATTTTGTGAGGAAGGTGGTGTTCCTCATATATCTAGCTATCTTCCAAGTGCGTGTCCTCCTCCTTCTGCTTTCTTAGGTCCAAAATGCGCACTTTGGGACTGTCCAAGACCTGTTCAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTAAATGAAGGACCACCAGGCATGACCCCAGTTCTAAGACCTGGGGGAATTGGACTCAAGGATAATTTACTTTTCGCAGCTCTTAGTGCAAAGGCACACGGAAAAGTTGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAATCTCCATGGAATGCACCTGAACTCTTTGATATTTGTGTCCTGGAGGGTGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCTAGAAGGGCTTTTGAGAGTGGGAACAGAAAGCAGAGGTCCCTGCCGGATTACAGCGGGCGTGGATGGCATGAATCTAGAAAACAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTACATGGACCCTCAGCCTCTGAACCTTTTTGAGTGGCACCTTTACGAGTATGAAATTAGCATGTGTGATGCATGTGCCTTATATCGGTTAGAACTTAAGCTTGTTGATGGGAAAAAGAGCTCAAAGGCAAAGATAGTAACAGGTGATTCGGTTGCTGATCTGCAGAAGCACATGGGAAGCCTCTCTGCTGAGTTTCCCGATAGTAACAAACGGTCTGCCAAAGGTAGTAGAACCAAGCTTGGCATAGGAGGTGGTGTTTATTCAGCTTCTAACAGAGCTGCTCTACTAAATGCACCTTATCAATACGGCTTAACTGCACCATATGACTTTGTTGTTGACAACACAAGTGACTATATGTGA 1416 0.4555 MKKISKSSCKSASHRLFKDKARNHVDDLQVMFLDLQFARKESRTIDVALLEEQLHQMLREWKAELNEPSPASSLQQGGSLGSFSTDVYRLLQLCEEEDDATSPLVAPKPEPNDQTMQPGARVIVQEGQHEQEFLLLKECKHSAVGVPNMEANNLDGPALELHQFEFNKDLDHSFYAGTGFCEEGGVPHISSYLPSACPPPSAFLGPKCALWDCPRPVQGLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDNLLFAALSAKAHGKVVGIPECEGAATAKSPWNAPELFDICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNLFEWHLYEYEISMCDACALYRLELKLVDGKKSSKAKIVTGDSVADLQKHMGSLSAEFPDSNKRSAKGSRTKLGIGGGVYSASNRAALLNAPYQYGLTAPYDFVVDNTSDYM 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3104g00039 471 PANTHER TRANSCRIPTION FACTOR VOZ1 1 468 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3104g00039 Vium-Chr3104 230725 234159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3104g00039 3 470 VOZ-9 Transcription Factor Family AT1G28520 66.258 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vium3104g00039 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3104g00039 - - gmx:100784593 848.195