Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3104g00023 ATGGGAACTTGTGATACACACTTTTTTCTGTCTCTTATGCAGATTTTCATTCCGTGCTTGCTATGTATCATGGCCAAAGTTGAAGCTTTAAACGTAACAATCTCAGGCTTTTATGTGTTTGGAGACTCCACGGTAGACCCTGGAAACAATAACTACATCAAAACACCTTTCAAGAGCAATTTTCCACCTTATGGATTGGATTTTTCCAACCAGGTTCCAACAGGGAGATTTACCAATGGGAAGCTTGCCACCGATTACATCGTTTCATACACAGGTCTGAAGAAAGAGCTTCTTCCACCTTATCTGGATCCAAGCCTCACCAATGTGGAAGAGCTAATGACAGGAGTCAGTTTTGCCTCTGCCGGTTCTGGCTTTGACCCACTTACACCAACCATCACTAATGTAATTCCAATAGAAAAGCAGTTGGAATATTTCAGAGAATGCAAAAAGAGGATGGAGGATGCGATGGGGAAGCAAAGAATTGAAGATCATGTGAAGAAGGCTGCGTACTTCATCAGTGCTGGTACAAATGATTTCGTTCTTAATTATTTTTCTCTACCAGTACGAAGAAAGAGCTACACTCTCCAAGAGTATCAAAACTTCTTAATCCAACGCATCACAGATTTTATACAGAATTTGTTGGCAGAAGGTGGTAGAAAGATTGTAGTAGCTGGAATACCTCCAATGGGATGTCTACCGTTGATGATCACCATGAATTCTCCCGATGCCTTGTTCCAACGTGATTGCATTGAGAAATACTCTTCTATCGCAAGAGATTACAATCTGCTCCTTCAACAAGAATTACGCAAAATGCAATTGCACCTTATAAATTCCTCTGCTTCAAATGCTAAGATCTATTATGTCGACATATATAAACCCATTGCGGATATGATCCAATCTCGTAAGAGATTTGGATTTGAAGAGGTTGACAGTGGGTGCTGTGGAAGTGGGTTGATCGAAGCATCGATATTGTGTAACAAGATTTCAGATGTGTGTGTTGATCCATCAAAGTACGTATTCTGGGATTCGATTCACCCAACTCAGAAGGCATATCACAACATCTTCTTGAGCAGCATCTCTACCATTGACTTCATCATCAATAACTAG 1107 0.4056 MGTCDTHFFLSLMQIFIPCLLCIMAKVEALNVTISGFYVFGDSTVDPGNNNYIKTPFKSNFPPYGLDFSNQVPTGRFTNGKLATDYIVSYTGLKKELLPPYLDPSLTNVEELMTGVSFASAGSGFDPLTPTITNVIPIEKQLEYFRECKKRMEDAMGKQRIEDHVKKAAYFISAGTNDFVLNYFSLPVRRKSYTLQEYQNFLIQRITDFIQNLLAEGGRKIVVAGIPPMGCLPLMITMNSPDALFQRDCIEKYSSIARDYNLLLQQELRKMQLHLINSSASNAKIYYVDIYKPIADMIQSRKRFGFEEVDSGCCGSGLIEASILCNKISDVCVDPSKYVFWDSIHPTQKAYHNIFLSSISTIDFIINN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3104g00023 368 PANTHER GDSL ESTERASE/LIPASE EXL3 24 354 - -
Vium3104g00023 368 Pfam GDSL-like Lipase/Acylhydrolase 38 355 IPR001087 GO:0016788
Vium3104g00023 368 SUPERFAMILY SGNH hydrolase 166 354 - -
Vium3104g00023 368 Gene3D SGNH hydrolase 26 363 IPR036514 -
Vium3104g00023 368 CDD SGNH_plant_lipase_like 37 355 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3104g00023 Vium-Chr3104 142774 147816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3104g00023 8 354 Pollen Coat Proteome AT1G75930 34.957 4.14e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3104g00023 - - gmx:100788326 615.15