Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3104g00021 ATGGAGTACTTGGTAGTGAAAATCATGATACTGGCCACAATTCCATTCTATTCACTTGCTGCGGAAATTCCTCTAGTGAGACAAGTGGCTTCAAAGTATAATGTGTCTTGCATACTGGTTTTTGGAGATTCAAGTGTTGATTCTGGCAACAACAATGCCCTTCACACCACAATGAAAAGCAACTTTCTTCCCTACGGCAAGGACTTCTTTGACAGCCGCCCAACAGGACGGTTTAGCAATGGAAGACTTGCAACAGACTTTGTTGCTGAAGCAGTGGGGTATAGAAAGGTGATTCCACCGTTTCTGGACCCTAATTTGAAGCCGGAAGATCTTGAGTATGGTGTCAGTTTTGCATCAGCAGCCACAGGTTTTGATGATTACACAGCAGAAGTTTCGAATGTTTTGTCTGTTTCAAAACAATTGGAGTATTTTGCGCATTACAAGATCCATTTGAGAAGAGAGGTGGGCGAAGAAAGAGCAGAATTCATTACAAGAAATGCCTTGTATATTATCAGTATGGGTACAAACGATTTCCTTCAGAATTATTTCTTGGAACCTACACGCCCTAAGCAATTCAGCTTGGAAGAATTCGAGAATTTCTTGCTCTCTCGCTTCGCCAAGGACGTTAAGGAAATGCATAGACTTGGGGCAAGGAGGGTAATCATTGTAGGAGTCCTCCCTCTGGGATGCATTCCACTTATCAAGACACTTAGAAGTGCGGAAGGCTGTGATAAAAGTTTAAATAGTGTTGCTCATGCATTCAATGCAAAATTATTACAGCAATTAAACATCCTGAAGACAAAGCTGGGCTTAAGAACTGCTTTGGTTGATGTTTATGACATGATCCAACGTGCAGTCACCAATCCTAAAAAATATGGATTTGTCGAAGGTTCGAAAGGATGTGTTGGAACAGGGACAATAGAATATGGAGATTCATGCAAAGGGGTGAATAGTTGTTCGGATGCAGACAAATATGTATTCTGGGATGCTGTTCATCCAACGCAGAAAATGTACAAGTTAATAGCTGAAGAGGCCATTGCATCTTTTGTTACTAATTTCTTTTGA 1065 0.4103 MEYLVVKIMILATIPFYSLAAEIPLVRQVASKYNVSCILVFGDSSVDSGNNNALHTTMKSNFLPYGKDFFDSRPTGRFSNGRLATDFVAEAVGYRKVIPPFLDPNLKPEDLEYGVSFASAATGFDDYTAEVSNVLSVSKQLEYFAHYKIHLRREVGEERAEFITRNALYIISMGTNDFLQNYFLEPTRPKQFSLEEFENFLLSRFAKDVKEMHRLGARRVIIVGVLPLGCIPLIKTLRSAEGCDKSLNSVAHAFNAKLLQQLNILKTKLGLRTALVDVYDMIQRAVTNPKKYGFVEGSKGCVGTGTIEYGDSCKGVNSCSDADKYVFWDAVHPTQKMYKLIAEEAIASFVTNFF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3104g00021 354 Gene3D SGNH hydrolase 25 351 IPR036514 -
Vium3104g00021 354 CDD SGNH_plant_lipase_like 37 346 IPR035669 -
Vium3104g00021 354 Pfam GDSL-like Lipase/Acylhydrolase 38 344 IPR001087 GO:0016788
Vium3104g00021 354 PANTHER GDSL ESTERASE/LIPASE EXL3 17 344 - -
Vium3104g00021 354 SUPERFAMILY SGNH hydrolase 167 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3104g00021 Vium-Chr3104 135914 139656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3104g00021 19 346 Pollen Coat Proteome AT1G75910 34.111 2.44e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3104g00021 - - gmx:100819691 613.994