Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3104g00014 ATGGGTTCAGGCTATTGGTTTAAGACAATAATTAGCTTAAGAAAATCAAAACAAGGCAGATCAAAGAAAGCAAAGGGTATCTTAGCTCAAGAGAAACTAAATGCATCAAAGTCAAACAATTATACCGGGAAAGAGTCTAGTGATTTAGCAAATGGTATTAAAAGTGAAAACCTTGTCTCAGCTGGGGTGTCAGTTGAAACTATTGCTGCAACAAGGATCCAGACTGCATTCCGAGCTTATAAGGCTAGAAAGGCTTTACGGCGCGTGAAAGGATTTTCAAAACTGAAGATCTTAACAGAGGGTTTCTCTGTTAAAAAGCAAGCCAGTACAGCTATAACATACCTTCACTCATGGAGCAAGATTCAAGCCGAGATCAGAGATCGTCGAATATGTATGGTAACAGAAGACAGGATCAGGAGGAAGAAACTAGAGTCTCAACTAAAACTGGAAGCAAAGCTTCATGATCTGGAGGTTGAATGGTCTGGTGGTCCTGCAACCATGGAGGAAATCCTTGGAAAGATACATCAGAGGGAAGAAGCAGCAGTTAAGCGCGAAAGAGCCATGGCATATGCCTTTTCCCATCAGTGGAGGGCCAACTCTAGTCAGAGCCAACTGCTAGGTAGTTATGAACTTAGCAAGGCTAATTGGGGTTGGAGCTGGAAGGAACGGTGGGTTGCTGCTCGGCCTTGGGAAAGCCGCATCTCCGGCTTATCTGTCACCCCAGAGAAAACTCAACATAAGCAGCCAAGTAAGGTTCATAAGGATAAGAACACACCACCAAAAACTCCTGTATCAGTTAAACCTTCTTTAGCCATTGCAAAAGGGACTCCTCCTTCTGCCAATGCAAAAGGCAATTCAAAAGCTAGGAGATTGTCTTATCCACCGACTGCGGAGAAAACTGTGGTTCAAGGAGTGCAATGA 921 0.4376 MGSGYWFKTIISLRKSKQGRSKKAKGILAQEKLNASKSNNYTGKESSDLANGIKSENLVSAGVSVETIAATRIQTAFRAYKARKALRRVKGFSKLKILTEGFSVKKQASTAITYLHSWSKIQAEIRDRRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWSGGPATMEEILGKIHQREEAAVKRERAMAYAFSHQWRANSSQSQLLGSYELSKANWGWSWKERWVAARPWESRISGLSVTPEKTQHKQPSKVHKDKNTPPKTPVSVKPSLAIAKGTPPSANAKGNSKARRLSYPPTAEKTVVQGVQ 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3104g00014 306 MobiDBLite consensus disorder prediction 237 306 - -
Vium3104g00014 306 MobiDBLite consensus disorder prediction 246 260 - -
Vium3104g00014 306 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Vium3104g00014 306 PANTHER IQ-DOMAIN 5-RELATED 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3104g00014 Vium-Chr3104 82203 86334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3104g00014 1 294 IQD Protein Family AT2G33990 51.701 2.58e-89 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3104g00014 - - var:108341135 600.512