Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3104g00009 ATGGAAAGGATCAAAACCTTAGAGCGCATTGTCGTAATCCCTTCTCAGCCTCCCTTCCTTCAGGACCACTCACTCCCTCTCTCCCACCTCGACACCGACCCCAACCTTTACCTCACCTTTCGCTACCTCCGCGTGTACACTTCAACCGCTTCACCTACCTCCCTCGACCCCTTCAACGTCATCTCCTCCTCCCTCTCCAACGCCCTCACCCAATTCTACCCCCTCGCCGCCACACTACGCCGCCGCCCAACCTCCCCCCACCGTCTGGAACTCTGGTGTGCCGCTGCCCAGGGCATCCCCCTCGTCCGCGCCGCCGCCGATTTCACTCTCCACTCCGTCAACCACCTGGACGACCCGGCCTCGCCTCTCGTGGAGCAGTTGGTGCCCGACCCGGGTCCCGAGGAGGGGCTGGAGCACCCCTGCATACTCCAGGTGACGGTCTTCGCGTGCGGCGGGTTCGTCCTTGGCGCCGCCATGCACCATGCGCTATGCGACGGCATGGGGGGCACGCTGTTCTTCAACGCGGTGGCGGAGCTGGCGCGCGGGGCCACGCGGATGACGGTGGAGACGGTGTGGGAGCGTGATAGGCTATTGGGTCCCAGAAAGCCGCCAAGAGTGGATTCACCGTTGATCGATGAGTTTCTGCGTTTGGAAAAAGGAGTTCTGCCGTACGAGGAGGGCGTTGGCGGGGTTGCGAGAGAGTGCTTTCACGTGAAGGATGAGTGCTTGCACATGTTGAAGAGATCCTTGTTGGAGCAATCCGGGTTCAACTTCACCGTTTTTGAGGCTCTCGGTGCCTACATTTGGAGAGCCAAGGTGATGGCCTCTGGAATTCAGGGGGAGGAGAAGGTGAAGTTTGCATACTCAATCAACATACGGAGATTGGTAAAGCCAGCACTCCCTGGTGGGTATTGGGGCAATGGTTGTGTGCCAATGTACGTAGTGTTGAGTGCGAAGGAGTTGACAGAGAGACCCATCTGGGAAACTGCAGAGCTAATAAGAAAGAGTAAAAGCAATGTGAGCGATGAGTATGTGCGGTCCTACATAGATTATCAGGAGCTGCATTTTGGTGATGGGATCACAGCAGGAAGAGATGTGAGTGGGTTCACTGATTGGAGGCATTTGGGCCACTCAGCTGTGGACTTTGGGTGGGGAGGCCCAGTTACTGTTTTGCCGCTTGGAAGGAACCTGCTTGGGAGTGTTGAGCCTTGCTTCTTTTTGCCTTATTCAACTGCCTCTTCTCAGAATATAGAGGGCTTCAAAGTTTTGGTCACTTTGAGACACTCTGCATTACCAGCTTTCAGACAAGCCATGCAAGTCTTTTCCACTACCCAAGACCACTGGCCCAGTCACATATAG 1359 0.5622 MERIKTLERIVVIPSQPPFLQDHSLPLSHLDTDPNLYLTFRYLRVYTSTASPTSLDPFNVISSSLSNALTQFYPLAATLRRRPTSPHRLELWCAAAQGIPLVRAAADFTLHSVNHLDDPASPLVEQLVPDPGPEEGLEHPCILQVTVFACGGFVLGAAMHHALCDGMGGTLFFNAVAELARGATRMTVETVWERDRLLGPRKPPRVDSPLIDEFLRLEKGVLPYEEGVGGVARECFHVKDECLHMLKRSLLEQSGFNFTVFEALGAYIWRAKVMASGIQGEEKVKFAYSINIRRLVKPALPGGYWGNGCVPMYVVLSAKELTERPIWETAELIRKSKSNVSDEYVRSYIDYQELHFGDGITAGRDVSGFTDWRHLGHSAVDFGWGGPVTVLPLGRNLLGSVEPCFFLPYSTASSQNIEGFKVLVTLRHSALPAFRQAMQVFSTTQDHWPSHI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3104g00009 452 Pfam Transferase family 4 438 - -
Vium3104g00009 452 Gene3D - 229 439 IPR023213 -
Vium3104g00009 452 Gene3D - 2 212 IPR023213 -
Vium3104g00009 452 PANTHER ACYL TRANSFERASE 4 5 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3104g00009 Vium-Chr3104 66497 68278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3104g00009 46 394 Monolignol Biosynthesis Gene Families AT5G48930 28.453 1.84e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3104g00009 - - vra:106774544 902.508