Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium309g00007 | ATGGAAACCCAACTTGACTACAAAGCCAAAAGAGCAAACCCCACTTCCCCAACAAGCCTAAAGATCTTTGGGTTCAGCGTCCATGAAGACATCACCATGGAAGAGGAAGACGAGGTGGTCATTCATGATGACATGGAAGACTCAACCACCAAGGCATCTTCCACTTCCCCATCTGCCTCGCCGGACTCCGCCGGTGCCGGTTCCGGACCTCCGTCCTCCGGCGACCGGAAATACGAGTGTCAATACTGCTGCCGAGAGTTCGCAAATTCACAAGCACTTGGTGGGCACCAGAACGCGCACAAAAAAGAGCGTCAACAATTGAAGCGTGCGCAATTACAGGCCACGCGAAACGCCGCCGTTTCCTTTGCGCGGAACCCCATGATATCCGCCTTCGCCCCGCCGCCGCACCTGCTGGCTCCTCCGGGTTCTATGGTGGTCCCGGCGGCCCCGTGGGTGTACGTGCCGCCACGTTCCGCGCCCCCTCCCTTCCACGTGTCAGTATCGCACGGCTGTGCCTTCCCGTCGGCGAATGGCCACAACGGGTTGAGTAGTAATAACAGTAACAACGTTACCATAACGGGTGTGAAATCCGCGGGTGCAGGGATGTTTCCCTATGTTGGCGTTGTAGGTGATTCGCAATTAGCTTTGTCAACGGTGCAGGTGCAGGCCCGGGCCCACCACGCTACGGTTGATGGGCCCTCTTTGAGTAGGTTCTCCAAAGGGGATGGTGGGCCCAAATTTGATGATGCATGGGGCTTGGACTTGCACCTTAGCCTTGCGCCAGCTGCGCCGTGA | 795 | 0.5748 | METQLDYKAKRANPTSPTSLKIFGFSVHEDITMEEEDEVVIHDDMEDSTTKASSTSPSASPDSAGAGSGPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFARNPMISAFAPPPHLLAPPGSMVVPAAPWVYVPPRSAPPPFHVSVSHGCAFPSANGHNGLSSNNSNNVTITGVKSAGAGMFPYVGVVGDSQLALSTVQVQARAHHATVDGPSLSRFSKGDGGPKFDDAWGLDLHLSLAPAAP | 264 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium309g00007 | 264 | Gene3D | Classic Zinc Finger | 62 | 126 | - | - | |
Vium309g00007 | 264 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 78 | 105 | IPR013087 | - | |
Vium309g00007 | 264 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Vium309g00007 | 264 | PANTHER | ZINC FINGER PROTEIN 5 | 12 | 263 | IPR044299 | GO:0010090 | |
Vium309g00007 | 264 | FunFam | Zinc finger protein GIS3 | 66 | 128 | - | - | |
Vium309g00007 | 264 | MobiDBLite | consensus disorder prediction | 50 | 67 | - | - | |
Vium309g00007 | 264 | SUPERFAMILY | beta-beta-alpha zinc fingers | 74 | 105 | IPR036236 | - | |
Vium309g00007 | 264 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 80 | 100 | IPR013087 | - | |
Vium309g00007 | 264 | MobiDBLite | consensus disorder prediction | 34 | 75 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium309g00007 | Vium-Chr309 | 66719 | 67941 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium309g00007 | 4 | 263 | C2H2 Transcription Factor Family | AT1G68360 | 43.007 | 6.72e-51 | 165 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium309g00007 | - | - | gmx:102663095 | 404.445 |