Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium307g00021 ATGCACCTGTCGGAGAGAAGAGGCCGAAACGCAGCGAGGTACTTGCCAAGAAGAAAACAGTTGAAGAACTCATCAAAGCCGCCCGTGCACAAAAGGACCACCTCGCTCCTTTTCCAGAGTTTTGCCATTTCCACGCAAAGGCTAAACATGGAAGGACCGTATGGATCTGAGTGGCCAGAGGAAGAAAAGGTGAAGCGCAGAGAAATGGTTGATCATGAAGCACATTATGTATTTGTGCATGAGGTTGCCAATTCAAATGCTGATGAGATGACAACAATGCTTACTGCAGCAAAGACTTCAACTTGCTGTCTGAAGAATAGTGGTCCCTTGGTTGGATTTGTACAGTACCGCTTCGTGTTAGAAGAAGAGATACCAGTGCTTTATGTGTATGAATTACAGCTTGAGCCTCGTGTTCAGGGGAAGGGACTGGGGAAGTTTTTAATGCAACTTCTAGAGTTTATGGCGCAAAAGAACTGTATGGGTGCTGTCATGCTGACTGTTCAAAAGGCAAATGTATTAGCCGTGGATTTCTATATAAGTAAGCTTAGATACATCATATCAGCCACTTCACCTTCAAAAGTCAACCCAATGATGAACAAGAGTTATGAAATTCTTTGCAAAGTATTTAATGATGAAGCCAAAACTATTTTTGGAGATAGAGAAGATGAATAG 672 0.4256 MHLSERRGRNAARYLPRRKQLKNSSKPPVHKRTTSLLFQSFAISTQRLNMEGPYGSEWPEEEKVKRREMVDHEAHYVFVHEVANSNADEMTTMLTAAKTSTCCLKNSGPLVGFVQYRFVLEEEIPVLYVYELQLEPRVQGKGLGKFLMQLLEFMAQKNCMGAVMLTVQKANVLAVDFYISKLRYIISATSPSKVNPMMNKSYEILCKVFNDEAKTIFGDREDE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium307g00021 223 PANTHER N-ALPHA-ACETYLTRANSFERASE 40 47 217 IPR039949 GO:0010485|GO:0043998
Vium307g00021 223 MobiDBLite consensus disorder prediction 1 31 - -
Vium307g00021 223 Pfam Acetyltransferase (GNAT) family 98 178 IPR000182 GO:0016747
Vium307g00021 223 MobiDBLite consensus disorder prediction 12 26 - -
Vium307g00021 223 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 62 223 IPR000182 GO:0016747
Vium307g00021 223 Gene3D - 19 211 - -
Vium307g00021 223 CDD NAT_SF 104 166 - -
Vium307g00021 223 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 78 179 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium307g00021 Vium-Chr307 124053 128266 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium307g00021 Acetyltransf_1 2.3e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium307g00021 K20794 - gmx:100500318 262.307