Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium307g00020 ATGGAATCCGAGTCTCTGCAACGACGCCGTTCAAGCAGTGCCACCTGCAACAATGCACCTGTCGGAGAGAAGAGGCCGAAACGCAGCGAGGTACTTGCCAAGAAGAAAACAGTTGAAGAACTCATCAAAGCCGCCCGTGCACAAAAGGACCACCTCGCTCCTTTTCCAGAGTTTTGCCATTTCCACGCAAAGGGTCTCTCTTTGTGTTTGAAGTCAGGACATGGCAATAAACTTTCCTCAACTGTTAAGACTTATATTCAGAGTCTCCTTAAGCTAAACATGGAAGGACCGTATGGATCTGAGTGGCCAGAGGAAGAAAAGGTGAAGCGCAGAGAAATGGTTGATCATGAAGCACATTATGTATTTGTGCATGAGGTTGCCAATTCAAATGCTGATGAGATGACAACAATGCTTACTGCAGCAAAGACTTCAACTTGCTGTCTGAAGAATAGTGGTCCCTTGGTTGGATTTGTACAGTACCGCTTCGTGTTAGAAGAAGAGATACCAGTGCTTTATGTGTATGAATTACAGCTTGAGCCTCGTGTTCAGGGGAAGGGACTGGGGAAGTTTTTAATGCAACTTCTAGAGTTTATGGCGCAAAAGAACTGTATGGGTGCTGTCATGCTGACTGTTCAAAAGGCAAATGTATTAGCCGTGGATTTCTATATAAGTAAGCTTAGATACATCATATCAGCCACTTCACCTTCAAAAGTCAACCCAATGATGAACAAGAGTTATGAAATTCTTTGCAAAGTATTTAATGATGAAGCCAAAACTATTTTTGGAGATAGAGAAGATGAATAG 804 0.4291 MESESLQRRRSSSATCNNAPVGEKRPKRSEVLAKKKTVEELIKAARAQKDHLAPFPEFCHFHAKGLSLCLKSGHGNKLSSTVKTYIQSLLKLNMEGPYGSEWPEEEKVKRREMVDHEAHYVFVHEVANSNADEMTTMLTAAKTSTCCLKNSGPLVGFVQYRFVLEEEIPVLYVYELQLEPRVQGKGLGKFLMQLLEFMAQKNCMGAVMLTVQKANVLAVDFYISKLRYIISATSPSKVNPMMNKSYEILCKVFNDEAKTIFGDREDE 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium307g00020 267 CDD NAT_SF 148 210 - -
Vium307g00020 267 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 117 223 IPR016181 -
Vium307g00020 267 PANTHER N-ALPHA-ACETYLTRANSFERASE 40 23 261 IPR039949 GO:0010485|GO:0043998
Vium307g00020 267 Gene3D - 62 255 - -
Vium307g00020 267 MobiDBLite consensus disorder prediction 1 30 - -
Vium307g00020 267 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 106 267 IPR000182 GO:0016747
Vium307g00020 267 Pfam Acetyltransferase (GNAT) family 142 222 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium307g00020 Vium-Chr307 124053 128287 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium307g00020 Acetyltransf_1 3.5e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium307g00020 K20794 - gmx:100500318 392.119