Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3070g00004 ATGCTTGTGTTTCCAGTTGTCTTCTATGCAGTGCGGATCAACCTTGATGGTCTTTTGTTTCCATCATCTAGGCCTTTGGTTCTAGATAACATCAGATTTTCAATGATTACTGTGGCCCTTATTGTTTTTTCCTTTTGGGGAGCAAATTTCATACCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACTGCTGCAGCATGTTTAGCATTCATATTTCCAGCTGCCATCATCCTTAAGGATCGGTTCAACATTGCAACTAATAGGGACAAGATTCTTTCTGTCTTCATGATAGTCCTCGCAGTCTTTGCAAACGTTGTGGCTATATACAGTGATGCACTTGCCTTGATCAAGACTAGTCTTAGCTCAATGGGAGTGATTTCATGA 387 0.4109 MLVFPVVFYAVRINLDGLLFPSSRPLVLDNIRFSMITVALIVFSFWGANFIPSIWDIFQFTGATAAACLAFIFPAAIILKDRFNIATNRDKILSVFMIVLAVFANVVAIYSDALALIKTSLSSMGVIS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3070g00004 128 PANTHER AMINO ACID TRANSPORTER 1 106 - -
Vium3070g00004 128 Pfam Transmembrane amino acid transporter protein 1 110 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3070g00004 Vium-Chr3070 28872 30849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3070g00004 1 120 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.333 4.76e-52 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3070g00004 K14207 - vum:124833060 229.95