Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3063g00001 ATGAGAGTGATGACATTCTCCGTCTTCAAACTTCTTCTGTCATCATTCCTTCTCTGCAGTTTCTTGCAGGAACCCACCAATGCCCTTAGAAAGACGTACATTGTGTACATGGGAGGACACTCTCATGGTCCAGACCCTTCTCCCACTGATCTTGAAACAGCAACAAATTCCCATCATCAATTACTCGCTTCTGTCTTAGGAAGTCATGAGGATGCAAAGGAAGCAATTATGTACTCTTACAACAAGCATATCAATGGCTTCGCGGCCTTGCTCGAAGAGGAAGCAGCAGCAGAAATAGCAGAGTACCCAGAGGTAATTTCTGTTTTCTTGAGCAAAGAGCACAAATTGCACACTACCAGGTCATGGGATTTTCTGGGACTGGAAAAGAATGGAAAAGTTGCTGCAAACTCTGCTTGGACCAAAGCAAGATATGGTGAAAACACAATCATAGCCAACATTGATACAGGTTTGCTTGCTCTTTATTTAAAACTTATTAAATCTACTAACTTGAACGCGGATAAAATTTCATACA 532 0.4173 MRVMTFSVFKLLLSSFLLCSFLQEPTNALRKTYIVYMGGHSHGPDPSPTDLETATNSHHQLLASVLGSHEDAKEAIMYSYNKHINGFAALLEEEAAAEIAEYPEVISVFLSKEHKLHTTRSWDFLGLEKNGKVAANSAWTKARYGENTIIANIDTGLLALYLKLIKSTNLNADKISY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3063g00001 177 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 117 IPR037045 -
Vium3063g00001 177 Pfam Peptidase inhibitor I9 32 117 IPR010259 -
Vium3063g00001 177 FunFam Subtilisin-like protease SBT5.3 21 117 - -
Vium3063g00001 177 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 157 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3063g00001 Vium-Chr3063 458 1613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3063g00001 25 157 Subtilisin-like Serine Gene Family AT5G59810 59.398 7.65e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3063g00001 - - vum:124833027 333.569