Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3062g00021 GTTGTCATACGGTATTTTTATTCTGATTTAGGTTTCCTAAAAACTGATGAGTCTCTTCTTCAAGAAAGTGCTGAAGGAGGATGGCAGGATGGGGCTACAGCCGTATGTGTTTGGGTATTGGGACAAAGAGTTGCAGTTGCTCATATAGGAGATGCCAAGGCAGTATTAGCTCGGTCAACTGATGGATCACAAAATCCAGATGGTGTCCAGGCGCTGAAGGCCATTGTTCTGACTAGAGAACACAAACCTATCTTCCCACTGGAGCGTACACGCATTCAGAAGTCAGGGGGTTTTGTGAGCTCAGATGGACGATTATTAGGGCGTCTTGAAGTTTCTAGAGCTTTTGGAGATCGACAGTTTAAAAAGGTAGGTCTTGTTGCAAGCCCAGATGTCTATACTTTTGAAGTTACAAATACTGAGCATTTCATCATTCTTGGCTGTGATGGCTTGTGGGGGGTATTTGGTCCCAGCGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGGCTACCTGTTGCCACCGTGTGCCGTCGTCTTGTAAGGGAGGCTGTCCGTGAGCGTCGCTGTAAAGATAACTGCACTGCCATTATTATTGTATTTAAGCACAAATAA 615 0.4472 VVIRYFYSDLGFLKTDESLLQESAEGGWQDGATAVCVWVLGQRVAVAHIGDAKAVLARSTDGSQNPDGVQALKAIVLTREHKPIFPLERTRIQKSGGFVSSDGRLLGRLEVSRAFGDRQFKKVGLVASPDVYTFEVTNTEHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVATVCRRLVREAVRERRCKDNCTAIIIVFKHK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3062g00021 204 Gene3D - 9 204 IPR036457 -
Vium3062g00021 204 PANTHER PROTEIN PHOSPHATASE 2C 11 199 IPR015655 GO:0004722|GO:0006470
Vium3062g00021 204 SUPERFAMILY PP2C-like 11 202 IPR036457 -
Vium3062g00021 204 CDD PP2Cc 11 201 IPR001932 -
Vium3062g00021 204 SMART PP2C_4 1 199 IPR001932 -
Vium3062g00021 204 ProSiteProfiles PPM-type phosphatase domain profile. 1 201 IPR001932 -
Vium3062g00021 204 Pfam Protein phosphatase 2C 11 189 IPR001932 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3062g00021 11 153 PP2C-type Phosphatase Gene Family AT1G18030 68.493 2.75e-66 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3062g00021 K17500 - gmx:100815852 346.28