Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3062g00019 ACATTGAGCAATGTCAATATCTTTATAATCAGGAATCAAAGACCACCCCTCACTTTATCTTTACTGGTTCAGTTCTTCCTACTTGCATTACTGGGGATCACAGCAAACCAAGGGTTTTACTTGCTGGGATTATACTATGCTTCTCCAACTTTTGCTTCTGCATTGCAAAACTCAGTTCCTGCAATCACTTTTGTCTTGGCTTTGGCTTTAAGGCTTGAGGAAGCCAACATCACAAGGAGAGATGGATTGGCAAAAGTTCTTGGAACCATTGCTAGTGTGGGGGGTGCCACAGTAATTACTCTTTACAAAGGTCCTCCTCTTCTTCACCTGCAGATGGACCTAACACAAGGAGACACTTTAGAAGTAGATCAATCAACAAAAACGCAAAATTGGACTTGGGGCTGCATATACTTGCTTGGACATTGTCTGTCATGGGCTGGCTGGATAGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCAGCAAAACTAACCCTCACTTCGTTTACATGCTTCTTTGGATTGATCCAGTTCTTGATCATAGCAGCCTTTGCAGAAGATGACTTGGAGAATTGGAAGATACAGTCACTAGAGGAGCTTTTTATTATCCTATATGCAGGAATTATAGCATCTGGTGTTGTCATATCTCTCCAAACATGGTGTATTCAAAAGGGTGGTCCTGTGTTTGTTGCTGTCTTCCAGCCTGTGCAAACTATTCTAGTTGCTGTCATGGCAGCCCTAATTCTTGGTGATCAGTTATACTCAGGAGGGCTTATTGGTGCAATTCTCATTGTGCTTGGTCTATACTTAGTCCTATGGGGCAAAACCAACGAAAAAAAAGTGAGAGAGTCATCACCATCACTAACAAACCCCTTGCTTAAGGCAGAGGAAGAGAATAAAGAAATTGATGCAGCTTCCAAGGACATACCATGA 930 0.4226 TLSNVNIFIIRNQRPPLTLSLLVQFFLLALLGITANQGFYLLGLYYASPTFASALQNSVPAITFVLALALRLEEANITRRDGLAKVLGTIASVGGATVITLYKGPPLLHLQMDLTQGDTLEVDQSTKTQNWTWGCIYLLGHCLSWAGWIVFQAPVVKKYPAKLTLTSFTCFFGLIQFLIIAAFAEDDLENWKIQSLEELFIILYAGIIASGVVISLQTWCIQKGGPVFVAVFQPVQTILVAVMAALILGDQLYSGGLIGAILIVLGLYLVLWGKTNEKKVRESSPSLTNPLLKAEEENKEIDAASKDIP 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3062g00019 309 MobiDBLite consensus disorder prediction 293 309 - -
Vium3062g00019 309 Pfam EamA-like transporter family 10 100 IPR000620 GO:0016020
Vium3062g00019 309 Pfam EamA-like transporter family 133 271 IPR000620 GO:0016020
Vium3062g00019 309 PANTHER WAT1-RELATED PROTEIN 10 283 IPR030184 GO:0016020|GO:0022857
Vium3062g00019 309 SUPERFAMILY Multidrug resistance efflux transporter EmrE 17 101 - -
Vium3062g00019 309 MobiDBLite consensus disorder prediction 281 309 - -
Vium3062g00019 309 SUPERFAMILY Multidrug resistance efflux transporter EmrE 195 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3062g00019 Vium-Chr3062 102153 104492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3062g00019 8 303 Nodulin-like Gene Family AT3G18200 64.452 5.22e-139 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3062g00019 - - vum:124833018 579.711