Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3043g00015 ATGTCATCATCCATGGAACAAGAAGATAACACCCCAAAGCACACTATCATACCCACATTCCTCAGAAAACCTTCAGACGACCAGGCCAACTCCGCCGTCTCCTCTCACAAATCTTTGCATGTTTTCCGCCACAGCAGGAGGCGGTGTAGGAAGGAACTCACTGCGAAAGAGCCTGCCAAGGAAGGTGATGAAGACGAGGAGAAGGAAAAAGAAGAAGACGAAGATGGTGGTGACGTTGATGACAGAGAAGAGATAGAGAGGAAGATTCACACTTTGCAGAGGATTGTGCCTGGTGGGGAGTCATTAGGGGTGGACAAACTCTTTGATGAAACTGCTGGCTATATTCTGGCCTTGCAGTACCAAGTCAAAGCCTTGAGGGCTCTCACTGGTTTCTTTGAGAAGTTGGAGAAGGAGAAGACAAAGTTTGGAGGTTGA 435 0.4805 MSSSMEQEDNTPKHTIIPTFLRKPSDDQANSAVSSHKSLHVFRHSRRRCRKELTAKEPAKEGDEDEEKEKEEDEDGGDVDDREEIERKIHTLQRIVPGGESLGVDKLFDETAGYILALQYQVKALRALTGFFEKLEKEKTKFGG 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3043g00015 144 CDD bHLH_AtIBH1_like 83 129 IPR044549 GO:0006355
Vium3043g00015 144 MobiDBLite consensus disorder prediction 64 80 - -
Vium3043g00015 144 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 38 132 IPR044660 GO:0006355
Vium3043g00015 144 MobiDBLite consensus disorder prediction 1 86 - -
Vium3043g00015 144 MobiDBLite consensus disorder prediction 24 38 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3043g00015 82 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 46.809 4.42e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3043g00015 - - gmx:100817215 145.206