Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3014g00003 ATGGGCGATGGAGGCGTCCCGTGCATGCCTTTGCAGTATATTATGGAGAGGTTGCCGAGTTCCGAGAAGACTGTTGTGTGCGGAGGCAAGAGTGGGAATGGCTTCAATTCCAAGTTGTTCAAGTTTGCTGGCAATGAGAAGAGGAAGATGAAGGCGAGAAAGAGTGAATTGGGGTTGGACAGAGTGAGCAAGAGGAGCAGCAATGATCTTGAGAATGGTGGCGAAGTGGAGAAACAGCAAGAGAAGGTGCAGAAGGAGGAAGTGGAGGAAGGTGAATTGGGCACTTTGAAGTGGCCTAGGACTGACCTGGAAAATGGGGAGTTCGTGCCAGAGATGCCGCCACCAGCCCAACCGAGGAAGGGCGAGATTGAGAACGGTGAGATTGTGAGTGAGAAGTGGAAAGGAAGGGAGCTGGAGAAGGGGGAGATTGCTTCTGGGAAATGGAGGAAAGAGGATGTTGAAAGAGGGGAGATAGTTCCTGAGAAGGGTGGTAGGAAAGGGGAAGCTGAGAGAGGTGAATATGGGTCGTGGAGAGGTGTAAATGATGAAATTGAGAAGGGAGAATTCATTCCGGATAGATGGTACAAGGGGGATTATGACAGTAGAATCCGCAGGTACCATTCAGGTAGGGACAAAGGGTGGAAAATTGAACGTGAACGTGAACGTGAAAGTACACCTTCTTCTGGGAGATATTCTGGGGATGATTTTTTTAGGAAGAAGGATTTGAATATTCGTGGGAGTCAGCATTCTAAAAGTTCTCCCAGGTGGGAGGGTGGACAACAGCGTAATGTAAGGATCAGTTCTAAGATTGTGGATGACGAGAAGAACGTTCACAGCAATGGTAAGGACCATGCACGAGATTACACTTCTGGAAGTCGGTTGAAGAGGCTTGGTAATGATACTGACAGCTATGAGCGGAAGCATTCTACAGATTATGCCGGTTTAAAAAGCCGAAGACTTTCTGATGATAGCTGTCGCCAAGTTTATTCAGAAAACTATTCTCGTCGTTCTGTGGAACGGTCTTACCGAACTAATAATCCTACCAAATTATCGGCAGATAAATATTCAAGTAGGAATCATGAATCTTCTTTGTCTATTAGACAGGCTTATGACAGGCATGGGCGCAGCCCTGGTCATTCTGAGCGATCCCCACGTGACCGAGGCAGGTATTATGATCACAGGGATCGAACTCCAGTACGCAGGTCTCCTTGTGGTCGTGACAGATCTCCATATAACCGGGAGAAGTCCCCACATGGACGGGAGAGGTCCCCATATCCGTATAACCGGGAGAAATCCCCCCATGGTCGGGAGAGGTCGCCATATACAAGGAACTGGGACAGAAGTCGTCAGCCTGATCATAAATTGAGAAGTCCGACACGTTCTGAACAGTCACCACCCGATCGAAGTCGGCGGCACGATCCTAAGGATAGTACCACAAATTTGTTAGAAGCATCTACCCTTGAACAGGCTAGGAAAGACAGTCGACGTGATTCAAGTTGTAAAACCTTACCAAGTGAAAAACATGATTCCCAAAATTGTTGTAAGGATCAAGAAGATAAGCAGACTCAGAGAGATTCAAACTGTTCAAGTACCGAATCTCAGAATGAAAAAAGTGTGCAAGAGACCATTAAGTCTGTTGAGAAAGACATCTGCAATCAACCTTTAAATGAACACCGGAGTTGCAGCCCAACCGTTACCCACAAAGAATCTCCTCTCTCCGAGCCACCTCCTGAGGAGATGCCTTCTATGGAGGAGGATATGGACATTTGTGATACCCCTCCACATGTCCCTGTGGTGACAGATTTGTCTTCAGGGAAATGGTATTACCTGGACTATGGTGGTGTGGAAAATGGGCCTGCTAAATTGTGCGACATCAAGGTCCTTGTGGAGGAAGGTGTACTAATGTCAGATCACTTTATCAAGCACATAGATAGTGACAGGTGGTTAACAGTTGAAAATGCCGCGTCACCTTTGGCACCTCAGAACTTTCCTTCGATTGTGTCGGATAGCATAACTCAACTGGTAAATCCCCCAGAAGCTCCTGGTAATATCTTGTCAGATACAGCTGATATTTTTCAATCTGCTCATGAGAATCACCAGGAAATGCTAACCTCCTCGCCGCCTCCACTAGTGTGCCCCATTGACAGTTTGCGTTCATCTGAACTTTTGGAGGACTTCCACATTGATGAAAGAGTTAAAAATCTCTTGGAGGGTTATGATGTCACTCCTGAGATGGAACCTGAGGCAATAAAAGAAGTGTTGCTAATGAATTTTGAAAATGCAAGAGGGGAGGGATCGAGAGATTATGATGGTTTTCCTTGGAATGTTTCCTGCCTTGGGGAAGATTATGATTCTAGTACTGATTTAGCATCTAGAGATTCTGAGTCTATGTTAAGTATGTCATCTGATAAGGATAATGGACTAGGCTTTGGTATTTCTAGTGACTGGTTTTCCACCCGTTGGTCATGTAAGGGTGGTGACTGGAAGAGGAATGATGATTCCCTGGATAGATATTCCAGAAAGAAACTTGTCCTAAATAATGGTTTTTCGTTATGTCAAATGCCAAAGTCTGGATGTGAAGATCCTCGTTGGCCTCAAAAAGATGAACTGTATTTTCCTTCTCAAAACAAGAGGCTTGATCTTCCTCTGTGGGCTTTCTGTGCTGACGAGAGGGATGAATGCAGTGCTGCAGGTAGATCAGTTCAAAGTAAGCCTGTTTCTGTGAGAGGAGTGAAAGGCAATGTTCTTTCAGTGGTCAGGATAAATGCATGTGTAGTAAAGGACCAGGGGTCATTGGTCTCTGAGTCACGACACAAGACGCGGGGCAAGGAAAGACATCATTCTAGGTCAAGTCGGCCCTTCTCTGCAACCAGTGATAGCAAGAGATCATCAACTGAACATGATTCCCAGTTAAAAGCTTTTAGTGAACAAGGTTCTTACAGGATCATGGAATTCCTTAACACTCCCAAAGACCATCTCTGTACTATCCATGAGTTGCAATTACATTTGGGTGACTGGTATTATTACGAAGGTTCTGGGCGTGAAAGGGGCCCCTCATCATTTTCAGAGCTACAGTATTTAGTAGATCAAGGTATCATAAAAAGGCATAGCAGTGTGTTCAGGAAAAGTGACAAACTCTGGGTTCCTGTCACCTCTGGAACAGAAACATCTGATGGCAGTCTCACGATCCAACAAGAAAGCAGTTCAATATCTGGTTTTTCATCAAAGCAAACTCAGGCATGTGGTGAACCTTACACAAATTCAAGTTTGTTTAACAGCTTGCATCCTCAGTTTATTGGTTATACTCGTGGGAAGCTACATGAGCTTGTGATGAAATCATATAAGAGCCGAGAGTTTGCTGCAGCTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAAGAAATTGAAAAACAACTTTATTGGAAATCAGAAGGTGATGCACATGCAACCAAGAGAGCCCGGATACTTGATGATAGTGAAGATGACAGTGATTTGGAAGATGGTGATTTTACTATCGAGAAGGATGAATCTAGTTTTGAGGATCTATGTGGTGATGCTACTTTTCCTGAAGATGAAATTGGTGTTGCTGATTCTCAAATGGGAAGCTGGGACAATTTGGATGGCCGTGTGCTAGCACAGATTTTCCATTTTTTGAAATCTGATTTGAAGTCCCTTGTTTTTGCTTCATTGACTTGCAAGCGCTGGAGAGCTTCTGTAAGGTTTTATAAAGAAGTGTCAATGCAGGTCAATTTGTCATCCTTGGGTCATTCATGCACTGATGCCATGTTGTGGAACATTTTGAATGGATACGAGAAAGAGAAGATCAATTCTATAATTCTAAGGGGTTGTGTTAATATTACAGCTGAGATGCTTGAGAAAGTTCTTCTTTCATTTCCTGGTTTATTTACAGTAGACATTAGAGGGTGCAACCAGTTTGGAGAGCTGACTCTTAAATTTGCAAATGTGAAATGGATCAAGAGCCGGAGTTCATACTTGACTAAAATTTCTGAGGATCCTCACAAAATTAGAAGTCTTAAACACATTACAGAGCTAGCCTCGTCTGTTTCCAAATCCAGCAGTATAGGTATAGATGATTTTGGGCAATTGAAGGACTATTTTGATAGTGTGGATAAGAGAGATACCAAGCAATTGTTCCGTCAAAACTTGTACAAGCGATCAAAACTATATGATGCTAGAAAGTCCTCCTCCATTCTATCGAGGGATGCTCGAACAAGACGGTGGGCAATCAAGAAAACTGAAAGTGGTTATAAGAGGATGGAGGAATTCCTTGCTTCAAGACTCCGTGAAATTATGAAGACAAACTCTTGTGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAAATGGTTATTATAGTAGCCGTGGGTTGAATTCTGTGAAAGAAGACATAAGTAGAATGTGTCGTGATGCCATAAAAGTGAAGAATCGGGGTGATGCCAGTTACATGAATCATATTATCACACTGTTTATTCAGCTTGCAACACGGCTGGAAGAGAGTTCTAAATCTGTGCATGAGAGAAATCTACTGAAATCGTGGGACAATGACTTGCCTGCAGTGTCCTGCTCTACTTTGTCAAAGTATAAGAAGAATAGGTTAGTGAATGAAAGGAAGTATAGGAGTAACGGGACACATGGTTTGGATAATGTGGAATATACCTCTGATCGAGAAATTAAGAGGCGATTATCAAAGTTGAACAAAAAATCGATGGGCTCAGAGAGTGAAACATCTGATGATGATCTTGATATGTCTTATGAAGATGGAAAGAGTGACAGTGATACTACAACCTCTGACACTGAAAGCGAACGAGAAGTACATTCAGAAAGTCTGATTAGGGAGTCAAGAGGGGAAGGATACTTGACACCTGAGGAAGATTTGGATTTTATAACTGATGATCGAGAGTGGGGTGCACGCATGACAAAAGCAAGTTTGGTTCCTCCAGTTACCAGGAAATATAAAGTCATTGATCAATATTGCATTGTAGCCGATGAAGAGGATGTGCGAAGGAAGATGAGGGTTTCATTACCAGACGACTATGCTGAGAAGCTGAGTGCACAAAAGAATGGCACTGAGGAGTCAGATATGGAACTTCCTGAAGTGAAAGATTACAAACCTAGAAAGCAGCTAGGATATGAGGTTATCGAGCAAGAAGTTTATGGAATTGATCCTTTTACACACAATCTTTTGCTTGATTCTATGCCAGAAGAGTTAGATTGGGCTCTGCCAGAGAAGCATTTATTTATAGAAGATACACTCCTTCGAACATTGAATAGGCAAGGTAGAAATTTTACTGGAACTGGAAGCACTCCAATGAGCTACCCGTTGCGGCCTGTTGTTGAAGATATTAAAAGACAAGCTGAGGACGATTGTGATGCAAGAATGGTTAAAATGTGTCAAGGTATTCTGAAGGCCATGGACAGTCGTCCAGAAGACAAATACGTAGCTTATAGGAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGATTTGGGGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAAAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCAGAATTCTACAACATCTACCTCGAAAGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCCATGCATATGGCTAATTATGCCAGTCGAATATGTCATTCGTGCAGACCTAAATGTGAAGCCAAGGTTACTGCCGTTGATGGTCAATATCAAATTGGTATTTATAGTGTTCGTAAAATTCAACATGGTGAGGAGATCACTTTTGACTACAATTCTGTAACGGAGAGCAAGGAGGAGTATGAAGCATCGGTTTGTTTGTGTGGAAGCCAAGTATGCCGTGGGAGTTATCTGAATTTGACTGGTGAAGGGGCTTTCCAAAAGGTTCTGAAGGACTCTCATGGAATTCTTGATCGGCATTATTTGATGCTAGAAGCTTGTGAATTAAATTCTGTGTCTGAAGAGGACTATAATGACCTTGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCAGATTGGCTTGTTGCTTATGCGGCTCGCCTTGTGAGATTTATCAATTTTGAACGAACAAAACTTCCTGAAGAAATTCTAAAGCATAATCTGGAAGAAAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAAAGGAGTGATGCCGAAGTTCAGGCTGAGGGTGTTTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTTGATAAGGTAAGGTATGTCATGAGATGTATTTTTGGCGATCCACGGAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAACTGTTTCCTTCCTCTGGAAAGGTGAGGGTTCATTTGTTGAGGAGCTTCTTAAGTGCATCGCTCCTCATATTGAAGAAGAGATCTTGAAGGATCTCAAGCTTAAAATTCATGCTCACGATCCTTCAAATTCAGTAGATATTCAAAAAGAGCTTCGGAAATCTTTGTTATGGTTGAGGGATGAAATCCGAAATCTTCCTTGTACATATAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCTTATACCAAGTACTTCTTTAGGATACAGAATTATGAAGCGATTACATCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACACTAACAAGTCGGGAGCAGAATTTCAGGAGTACCGAAAGATATATGGCGAAAATTATTGTTTAGGACAGCTTATATTTTGGCATAACCAGAGTAATGCCGATCCAGATCGGAGCCTGGCTAGAGCTAGCAGGGGTTGCTTGTCTTTGCCAGATACCAGTTCCTTTTATGCCAAGGCGCAGAAGCCCTCTCGACATTGTGTTTATGGTCCAAGGACCGTCAGATCTATGCTTGCTAGAATGGAGAAGCAGCCGCAGAGATCTTGGCCCAAAGACCGGATATGGTCATTCAAAAGTTCTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAGTAAATAACTCTGCACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAAGCCATGTGGGACCGTTAA 7164 0.4291 MGDGGVPCMPLQYIMERLPSSEKTVVCGGKSGNGFNSKLFKFAGNEKRKMKARKSELGLDRVSKRSSNDLENGGEVEKQQEKVQKEEVEEGELGTLKWPRTDLENGEFVPEMPPPAQPRKGEIENGEIVSEKWKGRELEKGEIASGKWRKEDVERGEIVPEKGGRKGEAERGEYGSWRGVNDEIEKGEFIPDRWYKGDYDSRIRRYHSGRDKGWKIERERERESTPSSGRYSGDDFFRKKDLNIRGSQHSKSSPRWEGGQQRNVRISSKIVDDEKNVHSNGKDHARDYTSGSRLKRLGNDTDSYERKHSTDYAGLKSRRLSDDSCRQVYSENYSRRSVERSYRTNNPTKLSADKYSSRNHESSLSIRQAYDRHGRSPGHSERSPRDRGRYYDHRDRTPVRRSPCGRDRSPYNREKSPHGRERSPYPYNREKSPHGRERSPYTRNWDRSRQPDHKLRSPTRSEQSPPDRSRRHDPKDSTTNLLEASTLEQARKDSRRDSSCKTLPSEKHDSQNCCKDQEDKQTQRDSNCSSTESQNEKSVQETIKSVEKDICNQPLNEHRSCSPTVTHKESPLSEPPPEEMPSMEEDMDICDTPPHVPVVTDLSSGKWYYLDYGGVENGPAKLCDIKVLVEEGVLMSDHFIKHIDSDRWLTVENAASPLAPQNFPSIVSDSITQLVNPPEAPGNILSDTADIFQSAHENHQEMLTSSPPPLVCPIDSLRSSELLEDFHIDERVKNLLEGYDVTPEMEPEAIKEVLLMNFENARGEGSRDYDGFPWNVSCLGEDYDSSTDLASRDSESMLSMSSDKDNGLGFGISSDWFSTRWSCKGGDWKRNDDSLDRYSRKKLVLNNGFSLCQMPKSGCEDPRWPQKDELYFPSQNKRLDLPLWAFCADERDECSAAGRSVQSKPVSVRGVKGNVLSVVRINACVVKDQGSLVSESRHKTRGKERHHSRSSRPFSATSDSKRSSTEHDSQLKAFSEQGSYRIMEFLNTPKDHLCTIHELQLHLGDWYYYEGSGRERGPSSFSELQYLVDQGIIKRHSSVFRKSDKLWVPVTSGTETSDGSLTIQQESSSISGFSSKQTQACGEPYTNSSLFNSLHPQFIGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQLYWKSEGDAHATKRARILDDSEDDSDLEDGDFTIEKDESSFEDLCGDATFPEDEIGVADSQMGSWDNLDGRVLAQIFHFLKSDLKSLVFASLTCKRWRASVRFYKEVSMQVNLSSLGHSCTDAMLWNILNGYEKEKINSIILRGCVNITAEMLEKVLLSFPGLFTVDIRGCNQFGELTLKFANVKWIKSRSSYLTKISEDPHKIRSLKHITELASSVSKSSSIGIDDFGQLKDYFDSVDKRDTKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWAIKKTESGYKRMEEFLASRLREIMKTNSCDFFVPKVAEIEAKMKNGYYSSRGLNSVKEDISRMCRDAIKVKNRGDASYMNHIITLFIQLATRLEESSKSVHERNLLKSWDNDLPAVSCSTLSKYKKNRLVNERKYRSNGTHGLDNVEYTSDREIKRRLSKLNKKSMGSESETSDDDLDMSYEDGKSDSDTTTSDTESEREVHSESLIRESRGEGYLTPEEDLDFITDDREWGARMTKASLVPPVTRKYKVIDQYCIVADEEDVRRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKDYKPRKQLGYEVIEQEVYGIDPFTHNLLLDSMPEELDWALPEKHLFIEDTLLRTLNRQGRNFTGTGSTPMSYPLRPVVEDIKRQAEDDCDARMVKMCQGILKAMDSRPEDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHMANYASRICHSCRPKCEAKVTAVDGQYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEATVSFLWKGEGSFVEELLKCIAPHIEEEILKDLKLKIHAHDPSNSVDIQKELRKSLLWLRDEIRNLPCTYKCRHDAAADLIHIYAYTKYFFRIQNYEAITSPPVYISPLDLGPKYTNKSGAEFQEYRKIYGENYCLGQLIFWHNQSNADPDRSLARASRGCLSLPDTSSFYAKAQKPSRHCVYGPRTVRSMLARMEKQPQRSWPKDRIWSFKSSPKFFGSPMLDAVVNNSALDREMVHWLKHRPAIFQAMWDR 2387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 326 364 - -
Vium3014g00003 2387 Pfam SET domain 1902 1957 IPR001214 GO:0005515
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 210 246 - -
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 50 131 - -
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 365 478 - -
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 526 569 - -
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 147 172 - -
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 1602 1632 - -
Vium3014g00003 2387 Gene3D SET domain 1800 1988 IPR046341 -
Vium3014g00003 2387 Gene3D - 1202 1270 - -
Vium3014g00003 2387 SMART set_7 1823 1963 IPR001214 GO:0005515
Vium3014g00003 2387 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 429 2387 - -
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 267 325 - -
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 1578 1632 - -
Vium3014g00003 2387 SUPERFAMILY SET domain 1832 1980 IPR046341 -
Vium3014g00003 2387 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1968 2387 IPR045606 -
Vium3014g00003 2387 ProSiteProfiles SET domain profile. 1822 1957 IPR001214 GO:0005515
Vium3014g00003 2387 CDD SET_SETD2-like 1831 1979 - -
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 488 525 - -
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 210 582 - -
Vium3014g00003 2387 SUPERFAMILY F-box domain 1202 1244 IPR036047 GO:0005515
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 50 97 - -
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 934 972 - -
Vium3014g00003 2387 MobiDBLite consensus disorder prediction 247 266 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vium3014g00003 SET 3.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3014g00003 K22748 - gmx:100776205 4151.28