Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3009g00011 ATGTCAGCGGAAGCGTCTAAGCGCCACCAATGGCAGTGGGAGAACGCCACTGCCGGCGCCGCTGCTGGATTCGCCACCGTCGCTGTTATGCACCCCCTTGATGTTGTTCGAACTAGGTTCCAAGTTAACGACGGTCGAGTCTCGCATCTTCCCAGTTACAAGAACACTGCACACGCCGTTTTCACCATTGCTCGCTCCGAGGGATTAAGAGGCTTATATGCAGGCTTTCTTCCGGGGGTTCTTGGGTCTACCATTTCGTGGGGTTTATATTTCTTTTTTTATGACAAAGCCAAACAAAGATATGCAAGGAACAGGGAGGGGAAGTTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGGTTTGGTTTCCTTGTGCACAAATCCTGTCTGGCTAGTAAAAACGAGATTGCAGCTTCAAACTCCACTTCATCAGACACGTCCATACTCTGGGATTTATGATGCCTTTAAGACCATACTGAGGGAAGAAGGATTTAGAGCATTTTACAAAGGGATTGTTCCCAGCCTGTTTCTGGTTTCTCATGGTGCTATTCAGTTCACAGCATATGAGGAACTACGTAAAGTTATTGTTGATTTTAAGAGTGAGAGAAGTACAGTACATAATCAAAACCCAGATAAATTGCTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAACTTGCTGCGATACTGCTAACTTATCCATTTCAGGCATTCTTTCACCCCCTTTCTTTCAGGTTATGCGAGCCCGATTGCAGCAACGGCCTAGTGGTGATGGTGTTCCAAGATATATGGACACTTGGCATGTTGTGA 825 0.463 MSAEASKRHQWQWENATAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSHLPSYKNTAHAVFTIARSEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARNREGKLSPGLHLASAAEAGGLVSLCTNPVWLVKTRLQLQTPLHQTRPYSGIYDAFKTILREEGFRAFYKGIVPSLFLVSHGAIQFTAYEELRKVIVDFKSERSTVHNQNPDKLLNSVDYAVLGATSKLAAILLTYPFQAFFHPLSFRLCEPDCSNGLVVMVFQDIWTLGML 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3009g00011 274 Gene3D Mitochondrial carrier domain 1 106 IPR023395 -
Vium3009g00011 274 Pfam Mitochondrial carrier protein 109 199 IPR018108 -
Vium3009g00011 274 Pfam Mitochondrial carrier protein 11 104 IPR018108 -
Vium3009g00011 274 Gene3D Mitochondrial carrier domain 107 243 IPR023395 -
Vium3009g00011 274 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 242 IPR044712 GO:0006862|GO:0055085
Vium3009g00011 274 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Vium3009g00011 274 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Vium3009g00011 274 FunFam folate transporter 1, chloroplastic isoform X1 1 105 - -
Vium3009g00011 274 SUPERFAMILY Mitochondrial carrier 12 241 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3009g00011 Vium-Chr3009 20927 28468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3009g00011 32 243 Chloroplast and Mitochondria Gene Families AT1G25380 37.037 4.11e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3009g00011 K15115 - gmx:100809599 440.269