Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3009g00007 ATGTCAGCGGAAGCGTCTAAGCGCCACCAATGGCAGTGGGAGAACGCCACTGCCGGCGCCGCTGCTGGATTCGCCACCGTCGCTGTTATGCACCCCCTTGATGTTGTTCGAACTAGGTTCCAAGTTAACGACGGTCGAGTCTCGCATCTTCCCAGTTACAAGAACACTGCACACGCCGTTTTCACCATTGCTCGCTCCGAGGGATTAAGAGGCTTATATGCAGGCTTTCTTCCGGGGGTTCTTGGGTCTACCATTTCGTGGGGTTTATATTTCTTTTTTTATGACAAAGCCAAACAAAGATATGCAAGGAACAGGGAGGGGAAGTTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGGTTTGGTTTCCTTGTGCACAAATCCTGTCTGGCTAGTAAAAACGAGATTGCAGCTTCAAACTCCACTTCATCAGACACGTCCATACTCTGGGATTTATGATGCCTTTAAGACCATACTGAGGGAAGAAGGATTTAGAGCATTTTACAAAGGGATTGTTCCCAGCCTGTTTCTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAACTTGCTGCGATACTGCTAACTTATCCATTTCAGGTACAACTGTCTGTCCCCTCTTTTAAAGTTATGCGAGCCCGATTGCAGCAACGGCCTAGTGGTGATGGTGTTCCAAGATATATGGACACTTGGCATGTTGTGAAAGAAACTGCACGATTTGAAGGTATCCGAGGTTATTACAGAGGAATTACGGCAAACCTGTTGAAGAACGCTCCTGCTTCTTCAATAACATTTATTGTGTATGAAAACGTTCTAAAATTGCTTAAACCGACTACAAGGAATGACTGA 861 0.4611 MSAEASKRHQWQWENATAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSHLPSYKNTAHAVFTIARSEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARNREGKLSPGLHLASAAEAGGLVSLCTNPVWLVKTRLQLQTPLHQTRPYSGIYDAFKTILREEGFRAFYKGIVPSLFLNSVDYAVLGATSKLAAILLTYPFQVQLSVPSFKVMRARLQQRPSGDGVPRYMDTWHVVKETARFEGIRGYYRGITANLLKNAPASSITFIVYENVLKLLKPTTRND 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3009g00007 286 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 180 IPR044712 GO:0006862|GO:0055085
Vium3009g00007 286 Pfam Mitochondrial carrier protein 184 280 IPR018108 -
Vium3009g00007 286 Pfam Mitochondrial carrier protein 11 104 IPR018108 -
Vium3009g00007 286 Pfam Mitochondrial carrier protein 109 186 IPR018108 -
Vium3009g00007 286 Gene3D Mitochondrial carrier domain 185 286 IPR023395 -
Vium3009g00007 286 Gene3D Mitochondrial carrier domain 2 184 IPR023395 -
Vium3009g00007 286 SUPERFAMILY Mitochondrial carrier 12 274 IPR023395 -
Vium3009g00007 286 ProSiteProfiles Solute carrier (Solcar) repeat profile. 199 278 IPR018108 -
Vium3009g00007 286 FunFam folate transporter 1, chloroplastic isoform X1 1 105 - -
Vium3009g00007 286 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 198 IPR018108 -
Vium3009g00007 286 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3009g00007 Vium-Chr3009 20927 28470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3009g00007 32 279 Chloroplast and Mitochondria Gene Families AT2G47490 33.451 2.45e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3009g00007 K15115 - gmx:100809599 478.789