Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3009g00002 ATGTTGTTCGCACTAGGTTCCAAGTTAATGATGGTCGAGTTTCTCATCTTCCCAGTTACAAGAACACTGCTCACGCCGTTTTCACCATTGCGCGCTCTGAGCTATGATAAAGCCAAACAAAGATATGCAAGGAACGGGGAAGGGAAATTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGGTTTGGTTTGCCTGTGCACAAATCCTGTTTGGCTTGTAAAGACAAGATTGCAGCTTCAAAGTCCACTTCATCAGACGCGACCATACTCTGGGCTTTATGATGCATTTAGGACCATAACGAGGGAAGAGGGATTTAGTGCACTTTACAGAGGCATTGTTCCTGGTCTATTGCTGCAGGTCTCTCATGGTGCTATTCAGTTCACAGCATACGAGGAGCTCCGTAAAGTTATTATTGATTTTAAGAGTAAGAGAAGTACATTCCATAATCAAAATCCTGATAAATTGTTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAACTGGCTGCAATACTGCTAACCTATCCATTTCAGGTTATGCGGTCTCGCTTGCAGCAACGACCTAGTGGTGACGGGGTCCCAAGATATATGGATACTTGGCATGTTGTGAAAGAAACTGCACGATTTGAAGGTATCCGGGGTTTTTACAAAGGAATTACCGCCAACCTCTTGAAAAATGCTCCTGCTTCTTCAATAACATTTATTGTTTATGAAAATGTTTTAAAATTTCTTAAACCGACTATAAGGAATGACTGA 771 0.4228 MLFALGSKLMMVEFLIFPVTRTLLTPFSPLRALSYDKAKQRYARNGEGKLSPGLHLASAAEAGGLVCLCTNPVWLVKTRLQLQSPLHQTRPYSGLYDAFRTITREEGFSALYRGIVPGLLLQVSHGAIQFTAYEELRKVIIDFKSKRSTFHNQNPDKLLNSVDYAVLGATSKLAAILLTYPFQVMRSRLQQRPSGDGVPRYMDTWHVVKETARFEGIRGFYKGITANLLKNAPASSITFIVYENVLKFLKPTIRND 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3009g00002 256 FunFam Folate transporter 1, chloroplastic 47 254 - -
Vium3009g00002 256 Pfam Mitochondrial carrier protein 162 250 IPR018108 -
Vium3009g00002 256 Pfam Mitochondrial carrier protein 50 141 IPR018108 -
Vium3009g00002 256 SUPERFAMILY Mitochondrial carrier 24 244 IPR023395 -
Vium3009g00002 256 ProSiteProfiles Solute carrier (Solcar) repeat profile. 159 248 IPR018108 -
Vium3009g00002 256 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 33 252 IPR044712 GO:0006862|GO:0055085
Vium3009g00002 256 Gene3D Mitochondrial carrier domain 16 254 IPR023395 -
Vium3009g00002 256 ProSiteProfiles Solute carrier (Solcar) repeat profile. 50 139 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3009g00002 Vium-Chr3009 6734 14036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3009g00002 35 249 Chloroplast and Mitochondria Gene Families AT2G47490 39.070 2.06e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3009g00002 K15115 - gmx:100809599 393.275