Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3000g00007 ATGGCTCTTGAGGTTGCTGTCAAGGCTGCTACTGGTGCTCCAGATGTTCTCGGAGACTGTCCATTTTGCCAAAGGGTCCTTTTAACATTAGAGGAGAAGAAGATTCCGTACAAGCTCAACCTAATTGATCTCAGTAACAAACCCGAATGGTTTTTGGGTGTGAATCCTGAAGGAAAGGTGCCAGTGGCTCTTTTTGATGGAAAATGGGTGCCTGATTCTGATGTAATTGTGGGGATTCTCGAAGAAAAGTACCCAGAAATCTCTCTCGTTACTCCTCCTGAATTTGCCACCGTGGGATCAAAGATATTTGGGTCTTTTGTGAGTTTTCTTAAGAGCAAGGATCCGAATGATGGAACAGAGCAAGCGTTGCTGGCTGAATTGAGTGCTCTGGATGAACATCTTAAGGCCCATGGTCCATATATTGCTGGGGAGAAAGTCACTGCTGTTGACCTGAGTTTGGCACCAAAACTGTACCATCTTGTGGTCGTACTTGGCCACTTCAAGAAATGGAGTGTTCCAGAAAGTTTGTCACATGTCCACATCTACACTAAGCTGCTCTTCTCTCGTGAGTCATTTGAGAAAACCAAGCCTCTAAAGGAAGAGTTTGTTATTGCTGGATGGGCACCAAAAGTGAATGCTTGA 642 0.4486 MALEVAVKAATGAPDVLGDCPFCQRVLLTLEEKKIPYKLNLIDLSNKPEWFLGVNPEGKVPVALFDGKWVPDSDVIVGILEEKYPEISLVTPPEFATVGSKIFGSFVSFLKSKDPNDGTEQALLAELSALDEHLKAHGPYIAGEKVTAVDLSLAPKLYHLVVVLGHFKKWSVPESLSHVHIYTKLLFSRESFEKTKPLKEEFVIAGWAPKVNA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3000g00007 213 SFLD Main (cytGST) 19 184 - -
Vium3000g00007 213 CDD GST_C_DHAR 89 210 - -
Vium3000g00007 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 210 IPR044627 GO:0033355|GO:0045174|GO:0098869
Vium3000g00007 213 Pfam Glutathione S-transferase, C-terminal domain 120 178 - -
Vium3000g00007 213 SUPERFAMILY GST C-terminal domain-like 95 201 IPR036282 -
Vium3000g00007 213 CDD GST_N_family 20 77 - -
Vium3000g00007 213 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 213 - -
Vium3000g00007 213 Gene3D Glutaredoxin 1 89 - -
Vium3000g00007 213 SUPERFAMILY Thioredoxin-like 19 86 IPR036249 -
Vium3000g00007 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Vium3000g00007 213 Pfam Glutathione S-transferase, N-terminal domain 19 86 IPR004045 -
Vium3000g00007 213 SFLD Glutathione Transferase (cytosolic) 19 184 IPR040079 -
Vium3000g00007 213 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Vium3000g00007 213 Gene3D - 90 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3000g00007 Vium-Chr3000 55883 59154 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3000g00007 1 213 Glutathione S-transferase Gene Family AT1G75270 73.364 1.91e-112 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3000g00007 K21888 - gmx:100306061 392.504