Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2990g00014 ATGGGTATCTGCATATCAGTTTCAGAAAAAGATGATGATGAGAATGTGATACTATTTGAAGAAAGGAAGAAGGTCCTGAATGGGAGTCAGAGACTCTTCTCTGTTTACTCCAAACAGGGTACCAAAGGACTCAACCAAGATGCTGCCTCTATTCACCAGGGTTATGGAACGGAAGATGGAACATTTTGTGGCGTTTATGATGGTCATGGAGGGAATGGACACAGAGTGAGTAAAATAGTAAGCAGACAATTATCTTCCCTCATTCTGGAACAAAAGAATGCTCTTGAAAAGATTGATGCTATAGAAAATGGTTGTCACAACACCACCCCAAAAGACCATGTTGGCACAATGAAAGAGAACTCAGATGCAAACAACTTTCAGAAATGGAAAGAAGCAATTGTTAGTGCCTTCAAGGTGATGGAGAAAGAGGTCAAGCTTCAACATAATCTAGATTGCTCTGGCAGTGGAACCACTGCTGTAACTATCATAAAACAGGGTGAAGGTCTTATCATAGCAAATCTGGGCGATTCGAGAGCAGTGATGGGAACGATATGTGAAGAAAAACTCGTAGCCACCCAATTGACCACGGATTTGAAGCCCGAGTTACCTCGAGAAGCAGAAAGAATAAGAAGGTGCAATGGTTGTGTGTATGCATCAAAGGAAGAACCAGAAATCCAGAGAGTGTGGATGCCCAACAATGAACACTCCCCTGGCCTAGCCATGTCTCGATCTTTTGGAGATTTCTTGCTCAAGGATTATGGTGTTATTGCTATCCCAGATATTTCTCACCACCCTTTAGGATCAAGTGATCAATTTATTGTTCTTGCCAGTGATGGGGTGTGGGATGTACTAAGCAACAACGAGGTTGCATCAATTGTGTGGAGTGCAGAGAGTGAAGAGGTTGCAGCAAGAGCAGTAGTGGAAGCAGCAACTGCTGCATGGAAAAACAAGTTTCCTTCATATATGGCAGATGACTGCACTGTGGTTTGTCTCTTCTTGCACCAGAAACCACAGCTTCAGCCATTTCAAAACTAA 1035 0.429 MGICISVSEKDDDENVILFEERKKVLNGSQRLFSVYSKQGTKGLNQDAASIHQGYGTEDGTFCGVYDGHGGNGHRVSKIVSRQLSSLILEQKNALEKIDAIENGCHNTTPKDHVGTMKENSDANNFQKWKEAIVSAFKVMEKEVKLQHNLDCSGSGTTAVTIIKQGEGLIIANLGDSRAVMGTICEEKLVATQLTTDLKPELPREAERIRRCNGCVYASKEEPEIQRVWMPNNEHSPGLAMSRSFGDFLLKDYGVIAIPDISHHPLGSSDQFIVLASDGVWDVLSNNEVASIVWSAESEEVAARAVVEAATAAWKNKFPSYMADDCTVVCLFLHQKPQLQPFQN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2990g00014 344 SMART PP2C_4 22 331 IPR001932 -
Vium2990g00014 344 PANTHER PROTEIN PHOSPHATASE 33 331 IPR015655 GO:0004722|GO:0006470
Vium2990g00014 344 CDD PP2Cc 31 295 IPR001932 -
Vium2990g00014 344 Gene3D - 16 336 IPR036457 -
Vium2990g00014 344 ProSiteProfiles PPM-type phosphatase domain profile. 32 333 IPR001932 -
Vium2990g00014 344 SUPERFAMILY PP2C-like 26 335 IPR036457 -
Vium2990g00014 344 Pfam Protein phosphatase 2C 61 311 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2990g00014 Vium-Chr2990 89803 92679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2990g00014 30 338 PP2C-type Phosphatase Gene Family AT5G26010 50.482 1.85e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2990g00014 - - gmx:100815312 525.013