Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2990g00002 ATGTCGTTGAGAAGATCACCGTCTCCGTCCCCGTGCTGCGGCGACAGTCACTTCGTGCTGCTGGTGCCTGTCCTGCTCGTTATTCTCCACTCGCTCCTTCTGCTTCCTCATTCCTCGCTTGCTATTCGACCTACCGAGTCGGATCAGATCGAACTCGCCAACGCGACCGAGTCCAACGTCTCTCTCTCGCGACCTCGCGAAGGAAGCTTTGCCGACATAATTGATCGCGCGCTGGAGCACGAGTTCACCGAGAACGACCAGAACGAAGCGGCTGATCCGGGAAGTTTCAACAACAGTGTAGCAGAACAACAGGCTGTTCTGGAAACTGTGGCACGAGTCACACCAAACAAGAATGACACAAAGGATGAAAAGTCATTTCAACTACATCATGTATTCAATAGAGGTGAGGATACCCCAATGTTGATAGATCGGAAGGACAATGTCTTTATCATTTCTAACTTTAAATCCAAGTATCCCGTGCTCCAGCTAGATTTACGATTGATTTCAGACCTGGTAGTTGCTATTGTTTCAGCAACTTGTGGGGGCGTTGCATTTGCTTTTGCTGGACAACCGGTGATAACCGGATATCTTCTAGCTGGCTCCATAGTTGGTCCTGGCGGCTTTAACTTCGTCAGTGAAATGGTGCAGGTGGAAACAGTGGCACAGTTTGGTGTAATATTTCTTCTTTTTGCATTGGGCCTCGAGTTCTCCACAACAAAGCTTCGAGTTGTTCGAGCTGTTGCTGTTCTTGGAGGTCTACTTCAGATTTTTCTATTTATGTGCATGTGTGGACTTACTGTATCGCTATGTGGTGGTAAAGCTTCAGAAGGGGTTTTTGTTGGTGCTTTCCTTTCCATGTCTTCAACAGCAGTGGTCCTGAAGTTTTTGATGGAAAAGAACACCACTAATGCGCTTCATGGACAAGTCACAATTGGGACCCTTATTTTACAGGATTGTGCTGTTGGATTGCTCTTTGCATTGCTTCCAGTTCTGGGTGGCACCTCAGGTGTTTTTCAAGGAGTGTTATCAATGACCAAGCTGTTGGTGACTTTGATTGCTTTCCTCTCTGTTCTGACTATATTGTCTCGCACTTGCCTTCCATGGTTACTTAAACTGATGATAAGCCTCTCATCACAGACAAATGAGCTCTATCAATTGGCGTCTGTTGCATTCTGCTTGCTAGTAGCCTGGTGTAGCGATAAGCTGGGACTAAGTCTAGAATTAGGTTCCTTTGCCGCTGGAGTGATGATTGCAACCACTGATCTGGCTCAACACACACTAGAGCAAATTGAACCTATTCGCAATCTTTTTGCTGCTCTTTTCCTTGCCAGCATTGGAATGCTGATTCATGTTCATTTTCTCTGGAACCATGTTGATATTTTGGTAGCATCTGTAATATTGGTGATTGTTATAAAAACAATCATAATTGCATCTGTTGTGAAAGGATTTGGTTACAACAACAAGACCTCAATACTTGTTGGAATGTCGATGGCACAGATAGGAGAGTTTGCTTTTGTTCTTCTAAGTCGTGCTTCAAACCTCCATCTAGTTGAGGGTAAATTATATCTGCTGCTTCTTGGGACCACAGCTCTTAGTCTGGTAACAACTCCTCTACTTTTCAAGCTTATTCCTGCCGTAGTGCACCTTGGTGTGCTATTGAAGTGGTTCTCGCCTGACAGTTCAGTGGAGGTAATCACCTGTCTATCTTGGAATTGTTTGACTTCTGTTTGTCTGAAAGTCTATACACGTGCTTTCCATAGTTTTGACGGGTTTTCCAAGTGTTGTTGA 1788 0.4491 MSLRRSPSPSPCCGDSHFVLLVPVLLVILHSLLLLPHSSLAIRPTESDQIELANATESNVSLSRPREGSFADIIDRALEHEFTENDQNEAADPGSFNNSVAEQQAVLETVARVTPNKNDTKDEKSFQLHHVFNRGEDTPMLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVAIVSATCGGVAFAFAGQPVITGYLLAGSIVGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCMCGLTVSLCGGKASEGVFVGAFLSMSSTAVVLKFLMEKNTTNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVFQGVLSMTKLLVTLIAFLSVLTILSRTCLPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMIATTDLAQHTLEQIEPIRNLFAALFLASIGMLIHVHFLWNHVDILVASVILVIVIKTIIIASVVKGFGYNNKTSILVGMSMAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLKWFSPDSSVEVITCLSWNCLTSVCLKVYTRAFHSFDGFSKCC 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2990g00002 595 Gene3D - 165 548 IPR038770 -
Vium2990g00002 595 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 25 563 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vium2990g00002 595 Pfam Sodium/hydrogen exchanger family 172 541 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2990g00002 Vium-Chr2990 24576 40061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2990g00002 64 563 Antiporters AT5G11800 84.190 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2990g00002 K26735 - gmx:100811030 959.518