Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium2968g00022 | ATGGAGGCTACTTTACTCTTTCTCTCCTTTCTCACGTTTATACTCTCATTCCCACTCCATTCACCTTTTTCTTCTGCTCAGATTATGCAAGGTTTTGTAAGTTTGGACTGTGGAGGTACAACAGAATTCACTGATGAAATTGATCTTCGGTGGACTCCTGATAATAAGCTTACTTATGGACAAACAAGTACTATATCAGTTGCAAATGAGACACGGAAGCAATACACGACACTCAGACACTTTCCTGCTGATTCGAGGAAATACTGTTACACACTTGATGTTGTGAGTAGGACGAGGTATCTGCTCAGGGCCTCTTTCTTGTATGGGAACTTTGACAATAATAATGTTTATCCAAAATTTGACATTTCTGTTGGGGCTACACACTGGTCTACCATTGTTATATCGGATGCCAACAGCATAGAAATGCGAGAGCTTATATTTCTGGCTTCAAGTCCTACAGTGAGTGTTTGTTTATCAAATGCAACAACCGGACAACCATTCATCTCTACGCTTGAACTTCGCCAATTCAATGGTTCAGTTTATTATACACAACTTGAGGAACACTTTTACCTTAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAATGATGCTCCAATTAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCGGATTCTATAAAGAAAGCTAATTATCTTGTTGATGTAGCTGCTGGAACCGAAAAAATTTCTACAGAAGCACCAATTGATGTGAACAGAGATGAAATGCCACCAGTGAAAGTGATGCAGACAGCTGTAGTGGGTACTAATGGATCTCTAACTTACCGATTAAACTTGGATGGTTTTCCTGGTACTGGTTGGGCATTCACCTATTTTGCTGAGATTGAAGATCTGGGTCCCAATGAGTCCAGAAAATTCAGGCTAGTACTTCCAGGCCAGCCTGATGTTAGTAAGGCAGTTGTAAATATTGAAGAAAACGCTCAAGGGAAATATCGTCTTTATGAACCAGGATTTACCAATATATCCCTACCTTTTGTGCTCTCTTTTAGATTTGGCAAGACATATGATTCCTCTAGGGGACCTCTCCTAAACGCCATGGAGATAAACATGTATTTGGAGAAAAATGATGGTTCTCTAGATGGAGCAACTATCTCCAGCATACTTTCGCACTACTCTGAAGCAGACTGGGCCAAAGAAGGTGGTGATCCATGTCTACCTGTTCCATGGTCATGGGTTCGATGTAACTCTGATCCACAACCAAGAATAGTCTCAATCTTGTTATCCAATAGAAATTTGACTGGCAATATTCCTTTGGATATCACCAAATTGGTTGGTTTGGTTGAACTATGGCTTGATGGAAATATGTTGACTGGTCCATTACCTGATTTTATTGGGTGCATGGACTTAAAGATCATTCATCTAGAAAACAATCAATTGACCGGTGTGCTCCCAACTTCTTTAGTGAACCTTCCAAACTTGAGGGAACTGTATGTGCAAAATAACTTGTTATCTGGAACAATACCATCAGATCTTCTTAGTAAGGATTTGGTTTTGAACTACTCTGGAAACCTCAATCTTCACAAAGAAAGCAAAATAAAGGGGCATATGTACGTAATTATTGGTTCATCAGTTGGGGCTTCTGTTCTACTTTTGGCTACTGTTATATCTTGCCTGTATATGCGCAAAGGCAAGAGGAAATATTATCAGCAAGACCGAGCTGATTCTCTCCCTGCTCAAAGGCTGGCTTCTTGGAAGAACGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAATGCTACAAATAACTTCGAGAAAAAAATTGGTGCCGGTGGTTTTGGAGTTGTCTACTACGGGAAGCTAAAAGATGGAAAAGAGATAGCAGTTAAAGTTTTAACCAGTAATTCCTATCAAGGCAAGCGAGAGTTCTCGAATGAGGTAACTCTTCTTTCAAGAATACACCACAGAAATTTGGTACAGCTGCTTGGTTATTGTCGAGATGAAGAGAATAGTATGCTTGTCTATGAGTTCATGCATAATGGCACTCTCAAAGAACATCTTTATGGTCCATTAGCCAATGGAAGAAGCATCAACTGGATTAAGCGTCTTGAGATTGCTGAAGATGCTGCCAAAGGTATTGAATATCTTCATACGGGTTGTGTTCCTGTCGTTATTCATAGAGACTTAAAAAGCAGCAATATTCTTCTCGACAAGCACATGAAAGCCAAGGTTTCTGATTTCGGTCTTTCAAAACTTGCTGTTGATGGAGTCTCACATGTTTCAAGCATAGTTCGGGGAACAGTAGGATATCTTGATCCTGAGTACTATATTTCCCAACAGCTGACAGACAAGAGTGATGTTTATAGTTTTGGTGTAATTCTCCTTGAACTAATGTCTGGTCAAGAAGCAATATCAAATGAAAGCTTTGGTCTAAATTGCCGAAACATAGTCCAATGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGTATTATTGATCCCTTTTTGCAGAATGATTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAGCCTCATGGACATATGCGGCCATCAATTTCAGAAGTTCTAAAGGAGATCCAAGATGCCATATCTATTGAAAGACAGGCAGAAGCATTAAGAGAAGGGAACTCAGATGACATGTCCAAAAATTCTTTTCAGTCTTCCTTGAACATGGGTTCTATGGATCTAGTTGGAGCTGAGAGTTTCTTGTCAATTGATGAATCAGTTGCACAGCCAACAGCAAGATAG | 2793 | 0.3978 | MEATLLFLSFLTFILSFPLHSPFSSAQIMQGFVSLDCGGTTEFTDEIDLRWTPDNKLTYGQTSTISVANETRKQYTTLRHFPADSRKYCYTLDVVSRTRYLLRASFLYGNFDNNNVYPKFDISVGATHWSTIVISDANSIEMRELIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTQLEEHFYLSVSARINFGAENDAPIRYPDDPFDRIWESDSIKKANYLVDVAAGTEKISTEAPIDVNRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFTYFAEIEDLGPNESRKFRLVLPGQPDVSKAVVNIEENAQGKYRLYEPGFTNISLPFVLSFRFGKTYDSSRGPLLNAMEINMYLEKNDGSLDGATISSILSHYSEADWAKEGGDPCLPVPWSWVRCNSDPQPRIVSILLSNRNLTGNIPLDITKLVGLVELWLDGNMLTGPLPDFIGCMDLKIIHLENNQLTGVLPTSLVNLPNLRELYVQNNLLSGTIPSDLLSKDLVLNYSGNLNLHKESKIKGHMYVIIGSSVGASVLLLATVISCLYMRKGKRKYYQQDRADSLPAQRLASWKNDDPAEAAHCFSFSEIENATNNFEKKIGAGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCRDEENSMLVYEFMHNGTLKEHLYGPLANGRSINWIKRLEIAEDAAKGIEYLHTGCVPVVIHRDLKSSNILLDKHMKAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELMSGQEAISNESFGLNCRNIVQWAKLHIESGDIQGIIDPFLQNDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAISIERQAEALREGNSDDMSKNSFQSSLNMGSMDLVGAESFLSIDESVAQPTAR | 930 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium2968g00022 | 930 | Gene3D | Transferase(Phosphotransferase) domain 1 | 678 | 901 | - | - | |
Vium2968g00022 | 930 | Pfam | Malectin-like domain | 35 | 364 | IPR024788 | - | |
Vium2968g00022 | 930 | Gene3D | Ribonuclease Inhibitor | 378 | 531 | IPR032675 | - | |
Vium2968g00022 | 930 | FunFam | Leucine-rich repeat receptor-like protein kinase | 580 | 677 | - | - | |
Vium2968g00022 | 930 | SUPERFAMILY | Protein kinase-like (PK-like) | 588 | 872 | IPR011009 | - | |
Vium2968g00022 | 930 | ProSitePatterns | Protein kinases ATP-binding region signature. | 608 | 630 | IPR017441 | GO:0005524 | |
Vium2968g00022 | 930 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 678 | 887 | - | - | |
Vium2968g00022 | 930 | CDD | STKc_IRAK | 608 | 875 | - | - | |
Vium2968g00022 | 930 | PANTHER | OS07G0107800 PROTEIN-RELATED | 465 | 878 | - | - | |
Vium2968g00022 | 930 | ProSiteProfiles | Protein kinase domain profile. | 602 | 878 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium2968g00022 | 930 | FunFam | Leucine-rich repeat protein kinase family protein | 377 | 529 | - | - | |
Vium2968g00022 | 930 | SMART | serkin_6 | 602 | 878 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium2968g00022 | 930 | Gene3D | Phosphorylase Kinase; domain 1 | 578 | 677 | - | - | |
Vium2968g00022 | 930 | Pfam | Protein tyrosine and serine/threonine kinase | 604 | 804 | IPR001245 | GO:0004672|GO:0006468 | |
Vium2968g00022 | 930 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 724 | 736 | IPR008271 | GO:0004672|GO:0006468 | |
Vium2968g00022 | 930 | SUPERFAMILY | L domain-like | 403 | 519 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium2968g00022 | Vium-Chr2968 | 136432 | 143408 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium2968g00022 | 24 | 712 | Receptor kinase-like Gene Family | AT2G37050 | 69.540 | 0.0 | 1007 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Vium2968g00022 | Malectin_like | 9.8e-77 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium2968g00022 | - | - | gmx:100784017 | 1741.86 |