Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2968g00006 ATGGCAACTTCCGTGTTAGATGTTCGGCCTCCTGCATTAACTTCCATCTCTGAACCACTCCCATTTTTTGATGGAACCACAAGGTTGTACATTTGCTATCTGTGCCCTTATGCACAACGTGCATGGATAACTAGAAACTGCAAGGGACTGCAAGACAAGATCGAATTGGTTCCTATTGACCTCACAAATAGGCCTTCTTGGTATAAGGAGAAAGTGTACCCTCTTAACAAGGTGCCATCGTTGGAGCACAATGACAAGGTTTTAGGAGAAAGTCTTGATTTGATCAGATATATAGATGCCAACTTTGAAGGGCCATCTCTATTTCCAAGTAATCCTGCCAAGAGAGAATTTGGAGAGCTAATGATATCCCATGTTGATACGTTCACCAGTGGCGTATACTCTTCGTATAAAGGAGATCCTGTACAACAAACCAGTGCTGCTTTTGATTACTTGGAAAATGCTCTTGGTAAATTTGATGATGGACCATTCTTTCTTGGCCAATTTAGTTTGGCGGATATTGCCTATGTTTCATTTATTGAAAGAATCCAATTGGTTTTTTCTGAAATTTTTGAGCACGACATCACAGCAGGAAGGCCCAAACTAGCCACATGGATTCAGGAGGCTAATAAGATTGAGGGATATAAGCAGACAAAAGTAGACAAGGAGGAGTATTTGGAAGCTTTCAAGATAAAGTTTTTGGCTTAA 705 0.4057 MATSVLDVRPPALTSISEPLPFFDGTTRLYICYLCPYAQRAWITRNCKGLQDKIELVPIDLTNRPSWYKEKVYPLNKVPSLEHNDKVLGESLDLIRYIDANFEGPSLFPSNPAKREFGELMISHVDTFTSGVYSSYKGDPVQQTSAAFDYLENALGKFDDGPFFLGQFSLADIAYVSFIERIQLVFSEIFEHDITAGRPKLATWIQEANKIEGYKQTKVDKEEYLEAFKIKFLA 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2968g00006 234 SFLD Glutathione Transferase (cytosolic) 28 209 IPR040079 -
Vium2968g00006 234 CDD GST_C_Lambda 112 229 - -
Vium2968g00006 234 Pfam Glutathione S-transferase, C-terminal domain 141 206 - -
Vium2968g00006 234 SUPERFAMILY Thioredoxin-like 20 107 IPR036249 -
Vium2968g00006 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Vium2968g00006 234 FunFam Glutathione S-transferase L2, chloroplastic 1 103 - -
Vium2968g00006 234 FunFam Lambda class glutathione S-transferase 104 234 - -
Vium2968g00006 234 Gene3D Glutaredoxin 1 103 - -
Vium2968g00006 234 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Vium2968g00006 234 Gene3D - 104 234 - -
Vium2968g00006 234 SUPERFAMILY GST C-terminal domain-like 102 230 IPR036282 -
Vium2968g00006 234 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 232 IPR044629 GO:0004364
Vium2968g00006 234 SFLD Main (cytGST) 28 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2968g00006 Vium-Chr2968 19646 21443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2968g00006 1 233 Glutathione S-transferase Gene Family AT5G02790 62.979 3.21e-109 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2968g00006 K00799 - gmx:100816962 435.261