Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2959g00016 ATGGCCAAAGTGGGAAAACTTACAAAGCTGAAGTCAGCCATAAAGAGATGGCCCTCATTGACCAAGCTCAGCCGCGGCAACAGCTGTGTCTCCTCCCACAAAGAAGCCACCAGAACATCCTCGTCATCCAAGGAACATGCACATGAACAAGAGCTTCATGCTGTTTATGTCGGCAAATCTAGGAGGCGTTACCTCGTAAACTCCGAAGTGATCGACCACCCTGTGTTCCAGGAGCTAGTGGATAGGTCTTCTTCGTCTCATGATGATGGGGTGGTGGTGTCCTGTGAGGTGGTGCTGTTCGAGCACTTGCTGTGGATGCTTGAGAGCGAAGAGACCCAGTTGGGGTCCATGGATGAGCTGGTCGAGTTTTACTCTTGTGCATGCTGA 387 0.5142 MAKVGKLTKLKSAIKRWPSLTKLSRGNSCVSSHKEATRTSSSSKEHAHEQELHAVYVGKSRRRYLVNSEVIDHPVFQELVDRSSSSHDDGVVVSCEVVLFEHLLWMLESEETQLGSMDELVEFYSCAC 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2959g00016 128 PANTHER EXPRESSED PROTEIN 24 125 - -
Vium2959g00016 128 MobiDBLite consensus disorder prediction 25 49 - -
Vium2959g00016 128 Pfam Auxin responsive protein 16 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2959g00016 Vium-Chr2959 108845 109742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2959g00016 3 107 Calmodulin-binding Proteins AT4G34750 23.636 2.28e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2959g00016 - - gmx:100797158 207.608