Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2959g00002 ATGGCAACCTTGAGAGTGTTTGTTGTGTTCGTTCTCTTTATTCTGAACATTCATCACTCTCATTCTGAAAAGAGCACATGTCCATCAGAAAATGATCAACCCATGTTCATATTTGGAGACTCTCTATATGATTCTGGAAACAATAACTACATTAACACCTCCCCAATTTTCCAAGGAAACTTCCCTCCATATGGACAATCTTTCTTCAAGTATCCCACTGGAAGACTGTCTGATGGACGTTTGATCACAGATTTTATTGCTGACTATGCAGAGTTTTCACATATTCCTCGGTTATTCTTAGACCCTAGACGGCTTAATTCATATACTAATGGAGTCAACTTTGCATCTGCTGGAGCTGGAGCTTTGCCTGAAACTAATCCAGGATTGGTATTCCTTTCCCTGATTTCTGAAATTCTCTGTTAA 423 0.3901 MATLRVFVVFVLFILNIHHSHSEKSTCPSENDQPMFIFGDSLYDSGNNNYINTSPIFQGNFPPYGQSFFKYPTGRLSDGRLITDFIADYAEFSHIPRLFLDPRRLNSYTNGVNFASAGAGALPETNPGLVFLSLISEILC 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2959g00002 140 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 130 IPR044552 -
Vium2959g00002 140 Pfam GDSL-like Lipase/Acylhydrolase 36 123 IPR001087 GO:0016788
Vium2959g00002 140 Gene3D SGNH hydrolase 22 138 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2959g00002 Vium-Chr2959 43058 43585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2959g00002 9 138 Pollen Coat Proteome AT1G75930 37.594 1.72e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2959g00002 - - vum:124832546 278.485