Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2950g00009 ATGGCATCTGATCACTCATCCCATAACCAGGCAAAATTCGTACTCGCAAACAATGACCTTGAGCAACAAGAAACTATGGAGGGTGAAACCAAGGACTTCGATTACTCAAAGCGATCTCAGTGGCTGCGTGCTGCTGTCCTAGGAGCCAATGACGGATTGGTCTCAACAGCATCTCTAATGATGGGTGTGGGAGCAGTGAAGCAAGACATAAAAGTTATGATCCTAACAGGGTTTGCAGGGCTAGTGGCCGGTGCATGCAGCATGGCCATAGGGGAGTTTGTGTCTGTGTACTCGCAGTTGGACATAGAAGTTGCTCAGATGAAAAGGGACAGTGAAAGGGAGAATGGCAGAGACAGAGATGAAGAGGAAGATGAGAAGGAGAAAGAGAGTTTACCAAACCCTATACATGCTGCAGCAGCCTCAGCTTTAGCATTTTCTGTTGGTGCAATTGTTCCTCTTCTTGCAGCCTCTTTCATAAGGGAGTATAAGGTGAGGATTGGTGTGGTTTTGGGAGCAGTGAGCTTCGCTCTTGTGGTGTTTGGTTGGCTTGGGGCAGTGTTGGGTAAGGCTCCAACATTGAGGTCTTGTGTGAGAGTGTTGGTTGGGGGTTGGCTAGCCATGGCCGTAACTTTTGGACTAACCAAGTTGATTGGGTCAAGTGGTCTTTAG 669 0.4813 MASDHSSHNQAKFVLANNDLEQQETMEGETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKRDSERENGRDRDEEEDEKEKESLPNPIHAAAASALAFSVGAIVPLLAASFIREYKVRIGVVLGAVSFALVVFGWLGAVLGKAPTLRSCVRVLVGGWLAMAVTFGLTKLIGSSGL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2950g00009 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 16 217 IPR008217 GO:0005384|GO:0030026
Vium2950g00009 222 Pfam VIT family 42 122 IPR008217 GO:0005384|GO:0030026
Vium2950g00009 222 Pfam VIT family 123 214 IPR008217 GO:0005384|GO:0030026
Vium2950g00009 222 MobiDBLite consensus disorder prediction 108 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2950g00009 Vium-Chr2950 78746 79774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2950g00009 17 222 Nodulin-like Gene Family AT3G43660 70.874 3.44e-103 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2950g00009 K22736 - gmx:100814343 353.599