Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2947g00007 ATGGGAATTTCTTCACACCCTTCTCTTGTCTCCCTCTCTTTGAAGGATCTGCTTGAGGGAACTGAAGCAAACAGAAATTCATCATACGGGTGTTTGAGGACCAAAAAGAAGGGTGTTATTAGGAGGCCAAGGAGGGTTTTGATGAAGAGAAGGGGTGGTTGTCGAAGAGGATCAAATGGGATTCGGAGACGCGTGAGAACATTGAAGACCCTTGTACCTAACTCTGATTCTTTGGGGTTGGATGGACTCTTCAGAGAAACTGCTAATTACATATTGTCCTTACAAACGAGAGTGAGGGTCATGCAGGTTATGGTTAAGGTACTGACAGCCTCTCACGACTGA 342 0.4532 MGISSHPSLVSLSLKDLLEGTEANRNSSYGCLRTKKKGVIRRPRRVLMKRRGGCRRGSNGIRRRVRTLKTLVPNSDSLGLDGLFRETANYILSLQTRVRVMQVMVKVLTASHD 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2947g00007 113 CDD bHLH_AtIBH1_like 50 105 IPR044549 GO:0006355
Vium2947g00007 113 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 34 108 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2947g00007 37 112 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 53.247 7.16e-20 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2947g00007 - - vum:124832498 203.371