Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2918g00009 ATGGGATCTCAAGGTGGGGCAGTTCAAGAGGCAAACACTACTACCCCTTTGGTTAGGCAAGGATCCTTGTACAATCTGACCCTAGATGAGGTGCATAACCAGATTGGGAATTTGGGGAAGCCACTTGGCTGCATGAATCTTGATGAGCTGCTGAAGAGTGTGTGGAGTGCTGACATGCAGGATGGCCAAGCTGCTTCAGATTCCTCTCTGAATCCTCAGGGCAATGTAACTTTGTCAAGGGATCTTAGCAGGAAAACTGTTGATGAGGTGTGGAGAGATATGCAACTGAAGAAGGATGAGAAAACCCAGAAAAGAAATCCTACACTTGGTGAGATGACTCTGGAGGATTTCTTGGTGAAAGCTGGAGTGGTAGGTGATTCAAATGGAGGTTCCTTACAGCATGGTCATTGGATGCAATACCAGCATTCTTCAGTGCAGCATCAGAATATGGTTGGGGGTTATGTGACTGGCCATGCCATTCAGCAGCCTTTTGTTCTTGATGCATCATACTCTGAGCCAGCTTCTGTAATAGGAGCTTTATCTGATACACAAACTCCCTGTCGAAAAAGGCTTGCCTCTGGTGATGTGGTGGAGAAAACTGTGGAGAGGAGGCACAAGAGAATGATTAAAAATAGAGAATCTGCTGCTAGATCTCGGGCAAGAAGACAGGCATACACACAAGAACTGGAGATTAAAGTTAAGCAGTTAGAAGAGGAGAATGAAAGGCTTAGAAGACTGAATGAGATTGAGAAGGCATTGCCATCTGTGCCACCACCTGAGCCTAAACAACAGCTTCGCAGAACTAGTTCAGCCATCTTTTGA 822 0.4574 MGSQGGAVQEANTTTPLVRQGSLYNLTLDEVHNQIGNLGKPLGCMNLDELLKSVWSADMQDGQAASDSSLNPQGNVTLSRDLSRKTVDEVWRDMQLKKDEKTQKRNPTLGEMTLEDFLVKAGVVGDSNGGSLQHGHWMQYQHSSVQHQNMVGGYVTGHAIQQPFVLDASYSEPASVIGALSDTQTPCRKRLASGDVVEKTVERRHKRMIKNRESAARSRARRQAYTQELEIKVKQLEEENERLRRLNEIEKALPSVPPPEPKQQLRRTSSAIF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2918g00009 273 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 206 221 IPR004827 GO:0003700|GO:0006355
Vium2918g00009 273 MobiDBLite consensus disorder prediction 249 273 - -
Vium2918g00009 273 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 201 253 - -
Vium2918g00009 273 Coils Coil 219 253 - -
Vium2918g00009 273 SMART brlzneu 199 267 IPR004827 GO:0003700|GO:0006355
Vium2918g00009 273 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 271 IPR043452 GO:0003700|GO:0045893
Vium2918g00009 273 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 201 245 IPR004827 GO:0003700|GO:0006355
Vium2918g00009 273 SUPERFAMILY Leucine zipper domain 203 248 IPR046347 GO:0003700|GO:0006355
Vium2918g00009 273 Pfam bZIP transcription factor 203 248 IPR004827 GO:0003700|GO:0006355
Vium2918g00009 273 Gene3D - 201 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2918g00009 Vium-Chr2918 125890 134902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2918g00009 1 273 bZIP Transcription Factor Family AT3G56850 55.184 8.75e-95 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vium2918g00009 bZIP_1 3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2918g00009 K14432 - gmx:100170741 397.127