Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2910g00007 ATGAGTCATATCAGGGAGGGGCTGATGTCCTATAAGCAGTTCATTCAGGAGCTTGAGGATGATATACTACCTGCTGAAGCAGAGCGTAGGTATCAAGAATACAAATCAGAGTATATTTCAACCCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAAGAGTGGTTGAAGGATAAATATCATCCAACAAATTTGCTTACAGTCATTGAAAGGAGGAATGAAAATGCTCGACAGCTAGCAAAGGAATTTTTGCTTGATTTACAGAGTGGAACATTAGAACTAAATCCTGGTTTGGAGGCCTCTGTATCCAACAAATCAGGGCAAGCTAGTGAGCCAAATTCAGAGGAGGAAGCAGACACTGGAGGCAAACGAAGAAGGCATGGAAGGGGACCTAATAAAGAAAATGATTTCTCAGCTGCTCCAAAGGCTCACCCAATCAGTTCTGAACCAAGAAGGATACAGGCAGATGTTCAACAGGCTCAGGTTCTTGTCCGGAAGCTTGATGCTGAAAAAGGGATTGAAGATAATACTTTGTGCAGCAGCAGCGATCATAATAAAAATGATGACAAGGCACACAGTGGATCTGTGGGCCCCATAGTAATTATTCGAGGCCTAACATCTGTTAAGGGTTTAGAAGGTTTCGAACTTCTGGATACACTTATAACTTACCTTTGGCGGATTCATGGTTTGGATTATTATGGCATGATTGAGACTAACGAGGCTAAGGGCTTTAGGCATGTGAGACCAGAAGGGACGGGGCATGAAGAAACAGGTAAATCAGGGTCGGACTGGGAGAAGAAGCTTGATTTATTTTGGCAAGGAAGGCTGAATGGTTTGGATCCCTTGGAAATAATGACTGCTAAGGAGAAGATAGATGCTGCAGCAATGGAAGTATTGGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGATGTGGAGCCAAGGGCTGCACAAAGCTTTTTCATGCTGCTGAATTTGTGCACAAACATCTGAAGCTCAAACACCCAGAGCTTGTTTTGGAACAGACTACGAAAGTACGAGAGGATCTCTACTTTCAAAATTACATGAATGATCCAGATGCTCCTGGCGGGACACCCATAATGCAGCAATCTCAGGTATACTGCTGTTTTTGCTTATAA 1155 0.4234 MSHIREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARQLAKEFLLDLQSGTLELNPGLEASVSNKSGQASEPNSEEEADTGGKRRRHGRGPNKENDFSAAPKAHPISSEPRRIQADVQQAQVLVRKLDAEKGIEDNTLCSSSDHNKNDDKAHSGSVGPIVIIRGLTSVKGLEGFELLDTLITYLWRIHGLDYYGMIETNEAKGFRHVRPEGTGHEETGKSGSDWEKKLDLFWQGRLNGLDPLEIMTAKEKIDAAAMEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVLEQTTKVREDLYFQNYMNDPDAPGGTPIMQQSQVYCCFCL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2910g00007 384 Pfam SERRATE/Ars2, N-terminal domain 12 93 IPR021933 -
Vium2910g00007 384 Pfam Arsenite-resistance protein 2 257 377 IPR007042 -
Vium2910g00007 384 ProSitePatterns Zinc finger C2H2 type domain signature. 317 340 IPR013087 -
Vium2910g00007 384 MobiDBLite consensus disorder prediction 116 133 - -
Vium2910g00007 384 MobiDBLite consensus disorder prediction 96 154 - -
Vium2910g00007 384 PANTHER ARSENITE-RESISTANCE PROTEIN 2 8 377 IPR039727 GO:0006397
Vium2910g00007 384 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2910g00007 Vium-Chr2910 81201 83297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2910g00007 5 376 C2H2 Transcription Factor Family AT2G27100 72.118 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2910g00007 K27103 - gmx:100811300 690.649