Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2910g00006 ATGGCGGAGGTCATGAATGTGCCTCCAGAATCCCTCGACAAATCCCCTTCCTCCGATGCTCCCCCTCCTCCGCCGCCGCCTCCACCTCCGACTCAGCCCTCCCCTGCTGCGGACGACCTCCCTCCCCCGCCCCCGCCGCCGCATTACCAGCCCCGGCGAAGAGACCGCAGAGACGACAGGGATTTCGATCGCCCTCCCAACCGCCGCGGCGATTACTATGACCGCAACGCGTCGCCGCCTCGAGACAGAGACCGGGACAGGGACAGGGATTTCAAGCGCCGACGTAGCCCGAGCCCTCCCCACCGCGACCAGCGGTATTCTCCGGCACCGCGGCGTTCGCCTCCGCCGTACAAGCGGTCGCGCCGGGGGAGTCCTCGGGGCGGATATGGACCTGATGATAGACATGGTTATAATTATTATGGTGCTTATGAACGGGGATTGGGTGGAAGAGGTGGTTATGCAGATGAGAAGTCCTATGGGAGGTTTGGACCACGTTCTGCTGGGGGTTATCAGAATGGGATTTCTGATGTGGAATCCAATCGTGGTTATGGAGACATGCCAAGCCAAAGGGAGGGGCTGATGTCCTATAAGCAGTTCATTCAGGAGCTTGAGGATGATATACTACCCGCTGAAGCAGAGCGTAGGTATCAAGAATACAAATCAGAGTATATTTCAACCCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAAGAGTGGTTGAAGGATAAATATCATCCAACAAATTTGCTTACAGTCATTGAAAGGAGGAATGAAAATGCTCGACAGCTAGCAAAGGAATTTTTGCTTGATTTACAGAGTGGAACATTAGAACTAAATCCTGGTTTGGAGGCCTCTGTATCCAACAAATCAGGGCAAGCTAGTGAGCCAAATTCAGAGGAGGAAGCAGACACTGGAGGCAAACGAAGAAGGCATGGAAGGGGACCTAATAAAGAAAATGATTTCTCAGCTGCTCCAAAGGCTCACCCAATCAGTTCTGAACCAAGAAGGATACAGGCAGATGTTCAACAGGCTCAGGTTCTTGTCCGGAAGCTTGATGCTGAAAAAGGGATTGAAGATAATACTTTGTGCAGCAGCAGCGATCATAATAAAAATGATGACAAGGCACACAGTGGATCTGTGGGCCCCATAGTAATTATTCGAGGCCTAACATCTGTTAAGGGTTTAGAAGGTGTCGAACTTCTGGATACACTTATAACTTACCTTTGGCGGATTCATGGTGTGGATTATTATGGCATGATTGAGACTAACGAGGCTAAGGGCTTTAGGCATGTGAGACCAGAAGGGACGGGGCATGAAGAAACAGGTAAATCAGGGTCGGACTGGGAGAAGAAGCTTGATTTATTTTGGCAAGGAAGGCTGAATGGTTTGGATCCCTTGGAAATAATGACTGCTAAGGAGAAGATAGATGCTGCAGCAATGGAAGTATTGGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGATGTGGAGCCAAGGGCTGCACAAAGCTTTTTCATGCTGCTGAATTTGTGCACAAACATCTGAAGCTCAAACACCCAGAGCTTGTTATGGAACAGACTACGAAAGTACGAGAGGATCTCTACTTTCAAAATTACATGAATGATCCAGATGCTCCTGGCGGGACACCCATAATGCAGCAATCTCAGGTATACTGCTGTTTTTGCTTATAA 1710 0.4895 MAEVMNVPPESLDKSPSSDAPPPPPPPPPPTQPSPAADDLPPPPPPPHYQPRRRDRRDDRDFDRPPNRRGDYYDRNASPPRDRDRDRDRDFKRRRSPSPPHRDQRYSPAPRRSPPPYKRSRRGSPRGGYGPDDRHGYNYYGAYERGLGGRGGYADEKSYGRFGPRSAGGYQNGISDVESNRGYGDMPSQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARQLAKEFLLDLQSGTLELNPGLEASVSNKSGQASEPNSEEEADTGGKRRRHGRGPNKENDFSAAPKAHPISSEPRRIQADVQQAQVLVRKLDAEKGIEDNTLCSSSDHNKNDDKAHSGSVGPIVIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNEAKGFRHVRPEGTGHEETGKSGSDWEKKLDLFWQGRLNGLDPLEIMTAKEKIDAAAMEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVMEQTTKVREDLYFQNYMNDPDAPGGTPIMQQSQVYCCFCL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2910g00006 569 Pfam SERRATE/Ars2, N-terminal domain 197 278 IPR021933 -
Vium2910g00006 569 ProSitePatterns Zinc finger C2H2 type domain signature. 502 525 IPR013087 -
Vium2910g00006 569 MobiDBLite consensus disorder prediction 1 157 - -
Vium2910g00006 569 MobiDBLite consensus disorder prediction 15 48 - -
Vium2910g00006 569 Pfam Arsenite-resistance protein 2 442 562 IPR007042 -
Vium2910g00006 569 MobiDBLite consensus disorder prediction 281 339 - -
Vium2910g00006 569 MobiDBLite consensus disorder prediction 301 318 - -
Vium2910g00006 569 PANTHER ARSENITE-RESISTANCE PROTEIN 2 52 562 IPR039727 GO:0006397
Vium2910g00006 569 MobiDBLite consensus disorder prediction 49 108 - -
Vium2910g00006 569 MobiDBLite consensus disorder prediction 281 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2910g00006 Vium-Chr2910 75550 81135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2910g00006 79 561 C2H2 Transcription Factor Family AT2G27100 66.206 0.0 608