Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium289g00003 | ATGGCGCACAAGCCTTTCAAATTCAATGAGCATATTCTCGAGCAACTGAGAAATGGGACTGCGAAATTCGAGCTTGTTTCTTCCCCCGCTCCTTCAGTTGCTGCTCCTCCGAACAACATCACAAGCTTGTTTGGAATTGGGAATCGTAGCGCTCTCTTTTTCGCTAGAATTGGCTCTTCCTCTATTGGGCACTCTCCCGCAATGAAGAAACTTGAGCATTTTTCAGTTCAGAAGGTTACAGGGGATGGGCGATGTCTGTTTCGTGCACTGGTCAAAGGAATGGCTTACAACAAGGGAACAGTTCTTAATCAACGTGAGGAGAGAGAAAATGCAGATGAATTAAGAATGGCTGTGAAAGAAGCTGTATGTGAAAATGAGGGTGAACGTAATTTATATGAAGAAGCCCTCATTGCCATCACAGTTGATGAACCTCTAAATCGTTACTGCCAACGGATCGTACGACCTGATTTCTGGGGAGGAGAATCAGAGCTGTTGGTGCTATCAAAGTTATGTAAACAGCCAATCGTTGTGTACATCCCAGAGCATGAGCATAGAGGCGGTGGTTTTGGATCTGGCTTCATTCCCATTGCTGAGTATGGAAGTGAATTTAGAAAGGGTTCTAGGAGAAAAGCTGTGAGGCTATTGTACAGCGGCAAGAACCATTATGATCTTCTGGTATGA | 681 | 0.4464 | MAHKPFKFNEHILEQLRNGTAKFELVSSPAPSVAAPPNNITSLFGIGNRSALFFARIGSSSIGHSPAMKKLEHFSVQKVTGDGRCLFRALVKGMAYNKGTVLNQREERENADELRMAVKEAVCENEGERNLYEEALIAITVDEPLNRYCQRIVRPDFWGGESELLVLSKLCKQPIVVYIPEHEHRGGGFGSGFIPIAEYGSEFRKGSRRKAVRLLYSGKNHYDLLV | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium289g00003 | 226 | ProSiteProfiles | OTU domain profile. | 74 | 226 | IPR003323 | - | |
Vium289g00003 | 226 | Pfam | OTU-like cysteine protease | 80 | 221 | IPR003323 | - | |
Vium289g00003 | 226 | Gene3D | - | 49 | 226 | - | - | |
Vium289g00003 | 226 | CDD | OTU_plant_OTU3-like | 72 | 226 | - | - | |
Vium289g00003 | 226 | SUPERFAMILY | Cysteine proteinases | 73 | 226 | IPR038765 | - | |
Vium289g00003 | 226 | FunFam | Cysteine proteinases superfamily protein | 53 | 226 | - | - | |
Vium289g00003 | 226 | PANTHER | HIV-INDUCED PROTEIN-7-LIKE PROTEASE | 59 | 226 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium289g00003 | Vium-Chr289 | 38748 | 44278 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium289g00003 | 71 | 178 | C2H2 Transcription Factor Family | AT1G50670 | 31.193 | 5.81e-06 | 43.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium289g00003 | - | - | gmx:100807522 | 414.075 |