Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2895g00011 ATGGATGAACACATGCACGGGATGGGAGGGATGGCGTCGCCGCCGTCACCGTCGCCGCCAACCGCAAACGACACCATGGGCACCATGATGCACCACAAGATGATGATGCACATGACCTTCTTCTGGGGCAAAGACACTGATATTCTCTTCCAAAACTGGCCGGGAGGCAAATCGGATATGTATATCTTGGCCCTCGTTTTCGTCTTCGTCATGTCGGTTTTCGTGCAGCTGCTCTCGCACACCCGTTTCATCAAACCCGGTTCAAACCATGTCGCGGCCGGTCTGTTCAAGACCCTCTTGTTCGCTTTCAGGGTTGGTCTCGCTTATCTGGTTATGCTTTCAATCATGTCTTTTAATGGTGGTGTTTTCTTGGTTGCTGTGCTAGGTCAGACCTTGGGGTTTCTCATTACAACATTCGCTTTCAACAAATCGCCCCATGACGAGGGTTTCGATCTTCCTCCAGTTTCTTGTTGA 474 0.5084 MDEHMHGMGGMASPPSPSPPTANDTMGTMMHHKMMMHMTFFWGKDTDILFQNWPGGKSDMYILALVFVFVMSVFVQLLSHTRFIKPGSNHVAAGLFKTLLFAFRVGLAYLVMLSIMSFNGGVFLVAVLGQTLGFLITTFAFNKSPHDEGFDLPPVSC 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2895g00011 157 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 27 144 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vium2895g00011 157 MobiDBLite consensus disorder prediction 1 24 - -
Vium2895g00011 157 Pfam Ctr copper transporter family 38 82 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vium2895g00011 157 Pfam Ctr copper transporter family 90 136 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2895g00011 Vium-Chr2895 44499 45332 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2895g00011 39 157 Inorganic Solute Cotransporters AT5G59030 45.968 2.07e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2895g00011 K14686 - gmx:100306175 226.098