Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2895g00010 ATGGATGAACACATGCACGGGATGGGAGGGATGGCGTCGCCGCCGTCACCGTCGCCGCCAACCGCAAACGACACCATGGGCACCATGATGCACCACAAGATGATGATGCACATGACCTTCTTCTGGGGCAAAGACACTGATATTCTCTTCCAAAACTGGCCGGGAGGCAAATCGGATATGTATATCTTGGCCCTCGTTTTCGTCTTCGTCATGTCGGTTTTCGTGCAGCTGCTCTCGCACACCCGTTTCATCAAACCCGGTTCAAACCATGTCGCGGCCGGTCAGACCTTGGGGTTTCTCATTACAACATTCGCTTTCAACAAATCGCCCCATGACGAGGGTTTCGATCTTCCTCCAGTTTCTTGTTGA 369 0.5285 MDEHMHGMGGMASPPSPSPPTANDTMGTMMHHKMMMHMTFFWGKDTDILFQNWPGGKSDMYILALVFVFVMSVFVQLLSHTRFIKPGSNHVAAGQTLGFLITTFAFNKSPHDEGFDLPPVSC 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2895g00010 122 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 27 82 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vium2895g00010 122 MobiDBLite consensus disorder prediction 1 25 - -
Vium2895g00010 122 Pfam Ctr copper transporter family 38 83 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2895g00010 Vium-Chr2895 44499 45339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2895g00010 31 94 Inorganic Solute Cotransporters AT5G59040 46.875 9.73e-16 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2895g00010 K14686 - gmx:100306175 154.451