Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2888g00014 ATGTCAGCTGCAAGATGCTGGGAGCTCGTCAGAGAGAAAGTGAATCAAGAAATTGCCAAGCAACATAAGCTGGGAAGAAAGGGCCTTCCTCCTTTACAGCCCCCGGGTAGCCTTGATGGCTTAGAAATGTTTGGGTTTTCTTCACCAGCAATAGTGCAGGCTATTGAAGCGCTGGATCGAAGTCGAGTGTGTAATGAATATTGGGACTCACGGCCGTACTCCCGCCCTTTAGGACAGATTTCACAATCATGCCAAAGCAGTGTTAGTGGTGGCAGTGGTCAAGGTGTTCTCTTGAATAAGCAAATTCCCGTTGATGTTGTTGCAGTATTAAGGAGCCTATGTAAAAAGGCTAATGCAGAAGAATTGAACTCGTTGTACAGCATTCTTAGTGAAAGTAGGCCACAGGCTGACAGGAGCCAAATTGCGCAATTTCTTAAAGAAGAGATGCACAAATCACAACCACCCTAG 468 0.4594 MSAARCWELVREKVNQEIAKQHKLGRKGLPPLQPPGSLDGLEMFGFSSPAIVQAIEALDRSRVCNEYWDSRPYSRPLGQISQSCQSSVSGGSGQGVLLNKQIPVDVVAVLRSLCKKANAEELNSLYSILSESRPQADRSQIAQFLKEEMHKSQPP 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2888g00014 155 Gene3D - 1 65 - -
Vium2888g00014 155 Pfam F/Y rich C-terminus 2 67 IPR003889 GO:0005634
Vium2888g00014 155 ProSiteProfiles FYR domain FYRC motif profile. 1 71 IPR003889 GO:0005634
Vium2888g00014 155 SMART fyrc_3 1 79 IPR003889 GO:0005634
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2888g00014 1 149 JUMONJI Transcription Factor Family AT1G08620 51.923 2.39e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2888g00014 K11446 - vum:124832299 291.967