Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2878g00030 ATGAGTGGCGGAGGAGAAGAAGGAGAGAGTCTGGAGTTCACTCCCACGTGGGTGGTGGCCGCCGTATGCACAGTCATCGTCGCCATCTCCCTCGCCGCAGAGCGCTTTCTTCATTTTGGCGGAAAATATCTCAAAGCCAAAGACCAGAAGCCGCTCTACGAAGCACTGCAGAAGATTAAAGAAGAGCTCATGCTTTTGGGCTTCATTTCCCTCCTTTTGACGGTTACACAAAATGGCATTACCAAAATCTGCGTTCCGCCGGCCTTCACGCGCCACATGCTTCCGTGTAGCCTTGACCTCGCTCCCAAACATGAATCTCATTTCCAGACATTTTATTTCCCGGGAACACCCAGACGCCTTCTCGCTGCCACTGCGGCGGAACACGCGCCGCCCCACTCCGAGGCTGAGGCGACTGAGACTGGAACCGAGACTGGGTTCTGCGCTCGCAAGCATAAGGTGCCTTTGTTGTCTGTGGAAGCACTGCACCATCTCCACATCTTCATTTTTGTATTGGCTGTCGTACACGTCGCCTTTTCCGTACTCACCGTTGTCTTTGGAGGTGCCAGAATTCGTCAATGGAAACACTGGGAAGATTCAATTGCAAAAAAGAACTACGAAACCGACCGAGTTCTGAAACCAAAGGTGACCGATGTTCAGCAGCATGATTTTATCAGGGGCCGTTTTTCTGGTTTTGGGAAAGATTCTGCTATAGTCGGTTGGATGATATCCTTTTCTAAGCAATTTTATGGATCTGTCACAAAATCAGATTATGTGACGTTACGACATGGTTTCATTATGACCCACTGCAAGTCAAATCCGAAGTTTAATTTTCACAAGTACATGATTCGCGCCCTTGAAGATGATTTCAAGCAAGTTGTTGGTATAAGTTGGTATCTTTGGCTCTTTGTGGTTATCTTCTTGTTGCTCAATATCAATGGTTGGCATACATATTTCTGGATTGCTTTTGTTCCTGTCATTCTTTTGCTTGCTGTGGGCACTAAGCTCGAGCATGTAATAACTCAACTAGCTCATGAAGTGGCTGAAAAACATGCAGCCATAGAAGGTGACTTAGTTGTGCAGCCATCAGATGAACACTTTTGGTTTCATCGGCCCCGTGTTGTCCTCTTCTTAATTCACTTTATCCTTTTCCAAAATGCCTTTGAGATAGCATTTTTTTTCTGGATATGGGTTACATATGGGTTTGACTCGTGTATAATGGGGCAAGTTCGATACATTATTCCAAGGCTCGTTATTGGGGTATTTATTCAGGTATTATGTAGCTACAGCACCCTGCCACTCTATGCAATAGTGACGCAGATGGGAACTCACTATAAGAGGGCAATATTTAATGAGCATTTGCAACACAACATTGTTGGTTGGGCACAAAAGGCGAAGAAGAGGAAAGAACTAAAAGCTGATGGCCGTCCTGCCCAAGGAAGTTCTCAGGAGAGTGGTAATACAGGAATCCAGCTTGGCTCAATTTTCCCGAAGAAGGCATCTGCTCCAGGCGACACTTCTTCTGCCCCCAAAGATGACGGAACCAGCTGA 1548 0.4638 MSGGGEEGESLEFTPTWVVAAVCTVIVAISLAAERFLHFGGKYLKAKDQKPLYEALQKIKEELMLLGFISLLLTVTQNGITKICVPPAFTRHMLPCSLDLAPKHESHFQTFYFPGTPRRLLAATAAEHAPPHSEAEATETGTETGFCARKHKVPLLSVEALHHLHIFIFVLAVVHVAFSVLTVVFGGARIRQWKHWEDSIAKKNYETDRVLKPKVTDVQQHDFIRGRFSGFGKDSAIVGWMISFSKQFYGSVTKSDYVTLRHGFIMTHCKSNPKFNFHKYMIRALEDDFKQVVGISWYLWLFVVIFLLLNINGWHTYFWIAFVPVILLLAVGTKLEHVITQLAHEVAEKHAAIEGDLVVQPSDEHFWFHRPRVVLFLIHFILFQNAFEIAFFFWIWVTYGFDSCIMGQVRYIIPRLVIGVFIQVLCSYSTLPLYAIVTQMGTHYKRAIFNEHLQHNIVGWAQKAKKRKELKADGRPAQGSSQESGNTGIQLGSIFPKKASAPGDTSSAPKDDGTS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2878g00030 515 MobiDBLite consensus disorder prediction 477 493 - -
Vium2878g00030 515 MobiDBLite consensus disorder prediction 468 515 - -
Vium2878g00030 515 Pfam Mlo family 9 476 IPR004326 GO:0006952|GO:0016020
Vium2878g00030 515 PANTHER MLO-LIKE PROTEIN 1 7 490 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2878g00030 Vium-Chr2878 178446 183919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2878g00030 3 485 MLO family AT4G02600 69.899 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2878g00030 K08472 - gmx:100785800 903.664