Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2878g00003 ATGTGTCGCAGAGGCAGAGCATTAGTCACCATGGCAAGCCACGAAGACGACCTCGATCTCCTTCTCTCTCTTCAAGACAGAGTTCCCGACACTCCTCCCGCTTCTCCCACACCAGGTTACCTTTCCGATGACGAATCGCTCAACCAAAGGGACAAACCTGACATGTCCGTATTCAAAAACGCCGTTCAAGATTGTCTTCCCTATGACCCCCCAAAAGCGCTCAAACCAACTAACAAACCTGTTACTAACGATTCCCAGCTTGAAAAGTTTTCAGGCCTTCGCATTAAGAACCAATTGTTAACTCCTGCGGAGTTGAAGGAACAATTTTCAGACATTCGCTTTGTTCGGTTATCTGTTATCAAGAATTCGTTGATTGGAGATAGTTTCTCTGGAAATTGGGCCACTGTTGGTGTTTTGACTGAGAAGGGGAGTCAGAAGACAAGTTCAACGGGGAAAAGCTTTTCTATATGGAAAATTGGGTGTCTGGATGAATGTACCATTTCTCTTTTCTTGTTCGGAGATGCTTATCAGAGGAACATGCAAGAGCAAGCGGGAACGGTCTTTGCACTGTTTAACTGTGCTGTTCGCAAGGATAGTGCGGGCAATGGTTTTTCTTTGAGTATATACTCCCCTAGACAAATTGTGAAGATGGGCACCTCTGTTGATTATGGGGTTTGCAAAGGGAAGCGAACAGATGGGATTGCTTGTACGCTGGTCATAAATAAACGTCATGGGACATATTGCAAATATCATAAATCAAAAGCATCAGAGAAATATTCCACGATGCGAAGTGAACTCATGGGAGGAAACTTAAGAACAGCGTTTAGGCCTAAGTCTAGGGATTACCTCAAATCAGAAGGAATTTACTTAGTTGACCCCCTTGCTGACAAAACAAACTCGAAGAATTCTCGGCCAGTGAAACTATTGTCCGCGGATGGTCTCAGAAAGGCATTGAGCAATGCAGGAAAAGTAACAACAACTCATCATTCTCAAGGGATCAGGTTTCTTTCTCAGCTTGCAGCCATGACGAATCCGAAAGCGAAGGATAAAGGATCAAAGATTCCACATGAACAAAAATGTACGGAGAAGAGGAAATCATCCTTTCCGAATGTGGCATCTTCTTCAGTCATAGGAAACCGACAGTTGGATGGAAAAAGAATAAAATCAGATGACCAGGTTTTGGCTGCTAAAACTTCAAAGCCTACTGAAAAGATGATTGAATTAGACTTTGTAAGCTCGGACGAAGACTTCTAA 1254 0.4338 MCRRGRALVTMASHEDDLDLLLSLQDRVPDTPPASPTPGYLSDDESLNQRDKPDMSVFKNAVQDCLPYDPPKALKPTNKPVTNDSQLEKFSGLRIKNQLLTPAELKEQFSDIRFVRLSVIKNSLIGDSFSGNWATVGVLTEKGSQKTSSTGKSFSIWKIGCLDECTISLFLFGDAYQRNMQEQAGTVFALFNCAVRKDSAGNGFSLSIYSPRQIVKMGTSVDYGVCKGKRTDGIACTLVINKRHGTYCKYHKSKASEKYSTMRSELMGGNLRTAFRPKSRDYLKSEGIYLVDPLADKTNSKNSRPVKLLSADGLRKALSNAGKVTTTHHSQGIRFLSQLAAMTNPKAKDKGSKIPHEQKCTEKRKSSFPNVASSSVIGNRQLDGKRIKSDDQVLAAKTSKPTEKMIELDFVSSDEDF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2878g00003 417 Gene3D - 78 252 IPR012340 -
Vium2878g00003 417 PANTHER PROTEIN MCM10 HOMOLOG 44 399 IPR040184 GO:0003690|GO:0003697|GO:0006270
Vium2878g00003 417 MobiDBLite consensus disorder prediction 345 375 - -
Vium2878g00003 417 FunFam DNA replication licensing factor mcm10 79 253 - -
Vium2878g00003 417 MobiDBLite consensus disorder prediction 349 364 - -
Vium2878g00003 417 Pfam Primase zinc finger 218 263 IPR015408 GO:0005634|GO:0006260
Vium2878g00003 417 MobiDBLite consensus disorder prediction 26 51 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2878g00003 27 416 Core DNA Replication Machinery Family AT2G20980 54.020 2.26e-139 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2878g00003 K10736 - gmx:100527758 617.461