Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2875g00001 ATGGAAAGCTTAAAAACACTTTTTAAGGGTGTTAAAGGGGACCTTGAAGGAAGAGCGGTCTTCTATAAAGATGATTGGACAACCGGTCTCTATTCAGGAACTAGAATATTGGCTCCAACTATCTATATTTTCTTTGCTTCTGCTCTTCCAGTCATTGCCTTTGGCGAGCAGCTAAGTAGAGACACAGATGGAAGCTTGAGCACTGTAGAAACGCTGGCTTCCACAGCTATTTGTGGAATCATACACTCAATTTTGGGTGGCCAGCCTCTCTTAATCATAGGAGTTGCTGAGCCCACTATCATTATGTACACATATTTGTACAACTTTGCCAAAGATAAGACTTCCTTGGGACGAGAACTCTTTTTAGCTTGGGCAGGATGGGTTTGTCTATGGACTGCTCTCTTGTTGTTTCTTCTAGCAATATTCAATGCTGGAAATATCATCAATAGATTTACAAGGATCGCGGGTGAGCTTTTTGGCATGTTGATCACAGTCTTGTTCATTCAAGAGGCTATAAAGGGAATTGTAAGTGAGTTTAATGTTCCTAAAGAGGGAGACCCAACATTGGAAAAGTACCATTTTAATTGGCTGTATGCAAATGGATTGATGGGCATTATATTCTCCTTTGGCCTTCTCTATACATCTTTAAAGAGCAGAAGAGCAAGGTCATGGTTATATGCCACAGGATGGTTTAGAAGTTTTGTTGCAGACTATGGGGTACCTTTCATGGTGGTGGTGTGGACAGCACTATCATTCACAGTACCAAGTAAAGTGCCTTCTGGAGTTCCTAGAAGGCTCACCTCTCCTCTTGTTTGGGAGTCTACATCTTTATATCATTGGACAGTAATTAAAGATATGGGGAAGGTTTCCCCGTCATATATTTTTGCTGCTTTTATTCCCGCAATAATGATAGCGGGACTTTACTTCTTTGACCATAGTGTTGCTTCCCAGATGGCACAACAGAAGGAATTCAATCTCAAGAAACCTTCTGCATACCACTATGACATATTGTTGCTAGGACTAACGACTTTGCTTTGTGGATTGATTGGCTTACCTCCTTCAAACGGAGTTCTTCCTCAATCTCCTATGCACACCAAGAGTCTGGCTGCTCTCAATAAACAGATGATCCGAAAAAAGATGGTTAAAAGTGCCAAGGAAAGCATAGATCTTAAAGCTAACAATTCTGAAATTTATGGAAAGATGCAAGCAGTATTTATAGAAATGGATAAGTGTCCAGATAATCATTTAGTGGACAAAGAACTAGAGGATTTGAAAGAGGTTGTCTTAAACGGTGAAGATAAAGGACATGACAAAAAGAGCAAGTTTGATCCTGAAAAACACATTGAAGCATATTTGCCCGTAAGAGTAAAGGAGCAGAGAGTGAGCAATCTCTTACAATCAATCTTTGTTGGAGCATCAGTCTTTGGCATGCCTGTCATAAAAAAGATACCAACTTCAGTTCTGTGGGGATATTTTGCGTACATGGCCATTGATAGTCTTCCAGGAAATCAATTTTGGGAAAGGATCTTACTCCTTTTTGTAACACCTAGTAGGTGGCACAAGTTGTTGGAGGGGGATCATGCTTCCTATGTCGAGTCAGTACCTTACAGATACATAGTATTGTTCACAGTCTTCCAATGTGTGTATTTCTTGGTTTGCTTTGGAGTGACATGGATTCCCATAGCTGGAATACTGTTCCCCTTGCCTTTCTTTTTACTGATAACATTGAGGCAGCATATACTCCCCAAGCTGTTCAAGCCTCAACATCTTAGGGAACTGGATGCAGCTGAATACGAAGAAATAATTGCTGCTCCAGGACAAACTTTCAATAGGTCTTTCAGGGATGTAGAATCACCCAGAGTTGGATCAGTGGAAATAGTTGATGCTGAAATATTAGATGAGTTAACTACAAATAGAGGGGAGTGGAAGATTAGAAATGTCAGCTCCAGTGAGGAAAGAAATCGCCAGGTGACAGCATTATCCACTTTAGCATCTCTCAGTTGCATAAAATGCTTTGAATGTTGCATGAACTCTAGAACACTATATTCTGATAAAAGAAGTTAG 2064 0.4031 MESLKTLFKGVKGDLEGRAVFYKDDWTTGLYSGTRILAPTIYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLIIGVAEPTIIMYTYLYNFAKDKTSLGRELFLAWAGWVCLWTALLLFLLAIFNAGNIINRFTRIAGELFGMLITVLFIQEAIKGIVSEFNVPKEGDPTLEKYHFNWLYANGLMGIIFSFGLLYTSLKSRRARSWLYATGWFRSFVADYGVPFMVVVWTALSFTVPSKVPSGVPRRLTSPLVWESTSLYHWTVIKDMGKVSPSYIFAAFIPAIMIAGLYFFDHSVASQMAQQKEFNLKKPSAYHYDILLLGLTTLLCGLIGLPPSNGVLPQSPMHTKSLAALNKQMIRKKMVKSAKESIDLKANNSEIYGKMQAVFIEMDKCPDNHLVDKELEDLKEVVLNGEDKGHDKKSKFDPEKHIEAYLPVRVKEQRVSNLLQSIFVGASVFGMPVIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWHKLLEGDHASYVESVPYRYIVLFTVFQCVYFLVCFGVTWIPIAGILFPLPFFLLITLRQHILPKLFKPQHLRELDAAEYEEIIAAPGQTFNRSFRDVESPRVGSVEIVDAEILDELTTNRGEWKIRNVSSSEERNRQVTALSTLASLSCIKCFECCMNSRTLYSDKRS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2875g00001 687 PANTHER ANION EXCHANGE PROTEIN 5 601 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vium2875g00001 687 Gene3D Helical hairpin bin 18 60 - -
Vium2875g00001 687 Pfam HCO3- transporter family 454 544 IPR011531 GO:0006820|GO:0016020
Vium2875g00001 687 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Vium2875g00001 687 Pfam HCO3- transporter family 199 374 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2875g00001 Vium-Chr2875 3635 7101 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2875g00001 1 657 Antiporters AT1G74810 67.976 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2875g00001 K24194 - gmx:100811184 1132.86