Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium286g00011 ATGGAGTTCCTGGACGAGGACGCGAGGCCGAGGTTCGTGTTCCAGTCCGGTGCCGTTGCAAGCACCGAACCACCGCACCCGGACCACAAACCTACCAAGCCGTTCCTCTTCGTCACCATTTCTCTCTCTTCGCTCTTCCTCGCTCTATCTCTCTTCTTCCTCGAATCGGAACCCTTCAAATCGCTCCTATTCTGGCTTGCGCTCTCTCTCCTCATCGGCCCCTTCGCTCCCCCCTCCCTCACCGGCGGCGACGTCCGCGTCGGCCTCGGCGAGGTCGTCAACTTCCCTGATCCGGAGCCGGAAACCGACGACGACGCTAGGAAGCCTCCGCAACGGCGATCCAGACAGCGGAGGCCCGAGGAAGTCGCCGCCATCGGCCCAGTGGTGTCCGTCAGCACCGCGGAGAAGAGAGGGGGAGGCGGCGGAGTGGAGAAGGTTTCGACGGTGGTGGAGGAGAAGGATTGGAACGAGGAGGATGTGGAGGTGCTGAAGAAGCAGCTGGTGAAGAATCCGGTGGGGAAGCCAGGGCGGTGGGAGGCGATAGCGGCGGCGTTCGGCGGAAGGCACGGTGTGGAGAGTGTGATAAAGACGGCAAAGGAGTTGGGGGAGAAGAAAGTGGATGATTCGGATTCTTATGCATTGTTCTTGAAAAATAGGAAGGCATTGGATAAGAGGGTTGTGGAGGAGAATGGGGGTGAGGACTCGGTGACGGTGGATAAAGTTGTTGAGAATGGTTGGAGTTCTGGCGAAGATATCGCGTTGTTGAATGCATTGAAAGTGTTCCCTAAGGATGTTTCAATGAGGTGGGAGAAGGTTGCTGCGGCGGTTCCCGGGAGATCCAAAGCTGCTTGCATGAGAAGATTTACTGAATTGAAGAAAGGGTTTCGGAATGCAAAAGCTGCAGCCGAGTGA 912 0.5735 MEFLDEDARPRFVFQSGAVASTEPPHPDHKPTKPFLFVTISLSSLFLALSLFFLESEPFKSLLFWLALSLLIGPFAPPSLTGGDVRVGLGEVVNFPDPEPETDDDARKPPQRRSRQRRPEEVAAIGPVVSVSTAEKRGGGGGVEKVSTVVEEKDWNEEDVEVLKKQLVKNPVGKPGRWEAIAAAFGGRHGVESVIKTAKELGEKKVDDSDSYALFLKNRKALDKRVVEENGGEDSVTVDKVVENGWSSGEDIALLNALKVFPKDVSMRWEKVAAAVPGRSKAACMRRFTELKKGFRNAKAAAE 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium286g00011 303 FunFam Myb family transcription factor 241 300 - -
Vium286g00011 303 Pfam Myb-like DNA-binding domain 245 291 IPR001005 -
Vium286g00011 303 Gene3D - 149 207 - -
Vium286g00011 303 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 147 301 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Vium286g00011 303 SUPERFAMILY Homeodomain-like 242 293 IPR009057 -
Vium286g00011 303 MobiDBLite consensus disorder prediction 91 121 - -
Vium286g00011 303 CDD SANT 246 292 IPR001005 -
Vium286g00011 303 SUPERFAMILY Homeodomain-like 149 191 IPR009057 -
Vium286g00011 303 Gene3D - 241 303 - -
Vium286g00011 303 ProSiteProfiles Myb-like domain profile. 246 292 IPR001005 -
Vium286g00011 303 MobiDBLite consensus disorder prediction 100 120 - -
Vium286g00011 303 SMART sant 151 204 IPR001005 -
Vium286g00011 303 SMART sant 242 294 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vium286g00011 Myb_DNA-binding 1.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium286g00011 - - gsj:114413206 460.685