Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2855g00001 ATGGTGGGTGTAGGATTAGGTGTAACAGCAGCAATGATTGCAACTCAGTTCTTGGAAGTGGGTCTCAACACTCTGATCAAAGAAGCAAACACCAATGGAATGAGTAATTTTGTCTTCATTGTCTATTCAAACTTTTTCGCTCTCTTCATCCTCTTACCATCAACCTTCTTCTACCACAGGAAGACACCTCCTCCTCCAATCCCAACATCAATTCTCTGTAAAATGTTTACTATTAGCTGCCTCAGCACTGTAGTGCAGACGTTGATGTACACCGGAATCTCATACAGCTCTCCTACACTGTGTTCTGCTATGGTTGACCTTGTTCCTGCTTTTACCTTCATATTTGCCCTTATTTCAAGGATGGAAAATCTGAATCTGAAACAGCAAAGCTGCCAGGCAAAAGTTTTTGGTACAGTGGTCTCCATTGCAGGGGCATTCATAGTCACTCTATATAAAGGAACGCCATTGAATTTCAATTCGTTGAGAAACGTTATCTTTGGTGAAAATGGAACTTACCTTTCAAAGCAATCAGATTGGATCGTTGGTGGTTTTCTTCTTGCAATTGCCAGTCTCTGCATTTCAGTTTTGCTTATTGTTCAGACTTCGGCTGTGAAGGAATATCCTGAAGAGTTAGTGATAACAACCATTTGTTGCAGCATGGTGGTCATCCTCTCTGCCATAGTTGCTGTCTTTGCAGAGGGAAATCCTAAAGCTTGGATACTGACATCTCAGAGAGAGTTCATAGCTGTATTTTATTCAGCAATATTTGTTGTATCAATGAGAAGTGTTGTGTGCACATGGGGATGCCGAAAGAAGGGAGCAGTTTATGTAGCAATGTTTAACCCTTTGGGAATGGTGATTGCACTTGGTATGGGGGTGATATTTCTGGGAGAGAGTCTTTACCTTGGAAGTGTGATTGGAGCGGCGATAATAGGTATTGGATTTTATTTGGTGCTGTGGGCACATGCTGAAGACAGTAATGTGGCAAAGGAGAATAACGAGAACCGTGATCTTGTGAGTTCCTCTGCAGCTCCTCTGTTGTCCACTAAAAGCATCGATGTACTGTGA 1068 0.4213 MVGVGLGVTAAMIATQFLEVGLNTLIKEANTNGMSNFVFIVYSNFFALFILLPSTFFYHRKTPPPPIPTSILCKMFTISCLSTVVQTLMYTGISYSSPTLCSAMVDLVPAFTFIFALISRMENLNLKQQSCQAKVFGTVVSIAGAFIVTLYKGTPLNFNSLRNVIFGENGTYLSKQSDWIVGGFLLAIASLCISVLLIVQTSAVKEYPEELVITTICCSMVVILSAIVAVFAEGNPKAWILTSQREFIAVFYSAIFVVSMRSVVCTWGCRKKGAVYVAMFNPLGMVIALGMGVIFLGESLYLGSVIGAAIIGIGFYLVLWAHAEDSNVAKENNENRDLVSSSAAPLLSTKSIDVL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2855g00001 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
Vium2855g00001 355 Pfam EamA-like transporter family 7 149 IPR000620 GO:0016020
Vium2855g00001 355 Pfam EamA-like transporter family 183 319 IPR000620 GO:0016020
Vium2855g00001 355 PANTHER WAT1-RELATED PROTEIN 9 330 IPR030184 GO:0016020|GO:0022857
Vium2855g00001 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2855g00001 Vium-Chr2855 32031 34519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2855g00001 11 353 Nodulin-like Gene Family AT3G28050 42.090 9.76e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2855g00001 - - vun:114173029 583.948