Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium284g00008 ATGACCACCACTTTAAAGCCACCCATTGGGTTGCGCTTCCTCCAACAACCGTCGTTTTTTCTTGGTTCCAAATCGCTAAAGTTCCCAACCACTCAGCTTCCCAGAATCAACTGTAGCCACTCCTCTTTCGAAGTTCGAGAGGTTAGCTATCAACCCCCGGGGACTCAGCTTAAACTTCTAAATTCAGTTAGCTTTTCACTTCCAGAGAAAAGTTTCGGCCTAATTTTCGGACAGAGTGGAAGTGGAAAAACAACCCTATTGCAGCTTCTTGCAGGAATATGCAAACCAACCTCGGGATCTATTTACATCCAAAAGTATGGGAATGATGGAAATCCTAGTCAAACTCCGGAGCCCTTGGTGCCAGAAAGGGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTATTTTGTCGCAGATAATGTGCTTGATGAAGTCACTTTTGGTTGGCCAAGGCAAAAGGGTAACCATCACCTCAGGGAGAATCTTACTCTAGGGCTACAAAGGGCAATTAACTGGGTAGTTATGCTTTTGTATACCACCAAGTGTATTTTTATAATACATGTTGGATTAAGTGGGATATCATTGGATAAAAATCCTCACTCCCTTAGTGGTGGTTACAAACGCCGTCTTGCCTTGGCAATACAATTAGTGCAAACCCCTGATCTATTGATATTGGATGAACCTCTTGCTGGACTCGAGAATTTGCGAATCTAG 711 0.436 MTTTLKPPIGLRFLQQPSFFLGSKSLKFPTTQLPRINCSHSSFEVREVSYQPPGTQLKLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGICKPTSGSIYIQKYGNDGNPSQTPEPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRQKGNHHLRENLTLGLQRAINWVVMLLYTTKCIFIIHVGLSGISLDKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLENLRI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium284g00008 236 Gene3D - 31 234 IPR027417 -
Vium284g00008 236 FunFam ABC transporter I family member 11 chloroplastic 32 234 - -
Vium284g00008 236 Pfam ABC transporter 60 229 IPR003439 GO:0005524
Vium284g00008 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 232 IPR027417 -
Vium284g00008 236 PANTHER HEAVY METAL TRANSPORTER 44 231 - -
Vium284g00008 236 CDD ABC_cobalt_CbiO_domain1 44 231 IPR015856 GO:0005524|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium284g00008 Vium-Chr284 108771 117923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium284g00008 44 233 Calmodulin-binding Proteins AT2G36910 25.521 1.93e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium284g00008 - - vun:114196181 408.297