Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium284g00008 | ATGACCACCACTTTAAAGCCACCCATTGGGTTGCGCTTCCTCCAACAACCGTCGTTTTTTCTTGGTTCCAAATCGCTAAAGTTCCCAACCACTCAGCTTCCCAGAATCAACTGTAGCCACTCCTCTTTCGAAGTTCGAGAGGTTAGCTATCAACCCCCGGGGACTCAGCTTAAACTTCTAAATTCAGTTAGCTTTTCACTTCCAGAGAAAAGTTTCGGCCTAATTTTCGGACAGAGTGGAAGTGGAAAAACAACCCTATTGCAGCTTCTTGCAGGAATATGCAAACCAACCTCGGGATCTATTTACATCCAAAAGTATGGGAATGATGGAAATCCTAGTCAAACTCCGGAGCCCTTGGTGCCAGAAAGGGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTATTTTGTCGCAGATAATGTGCTTGATGAAGTCACTTTTGGTTGGCCAAGGCAAAAGGGTAACCATCACCTCAGGGAGAATCTTACTCTAGGGCTACAAAGGGCAATTAACTGGGTAGTTATGCTTTTGTATACCACCAAGTGTATTTTTATAATACATGTTGGATTAAGTGGGATATCATTGGATAAAAATCCTCACTCCCTTAGTGGTGGTTACAAACGCCGTCTTGCCTTGGCAATACAATTAGTGCAAACCCCTGATCTATTGATATTGGATGAACCTCTTGCTGGACTCGAGAATTTGCGAATCTAG | 711 | 0.436 | MTTTLKPPIGLRFLQQPSFFLGSKSLKFPTTQLPRINCSHSSFEVREVSYQPPGTQLKLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGICKPTSGSIYIQKYGNDGNPSQTPEPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRQKGNHHLRENLTLGLQRAINWVVMLLYTTKCIFIIHVGLSGISLDKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLENLRI | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium284g00008 | 236 | Gene3D | - | 31 | 234 | IPR027417 | - | |
Vium284g00008 | 236 | FunFam | ABC transporter I family member 11 chloroplastic | 32 | 234 | - | - | |
Vium284g00008 | 236 | Pfam | ABC transporter | 60 | 229 | IPR003439 | GO:0005524 | |
Vium284g00008 | 236 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 39 | 232 | IPR027417 | - | |
Vium284g00008 | 236 | PANTHER | HEAVY METAL TRANSPORTER | 44 | 231 | - | - | |
Vium284g00008 | 236 | CDD | ABC_cobalt_CbiO_domain1 | 44 | 231 | IPR015856 | GO:0005524|GO:0016020|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium284g00008 | Vium-Chr284 | 108771 | 117923 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium284g00008 | 44 | 233 | Calmodulin-binding Proteins | AT2G36910 | 25.521 | 1.93e-09 | 55.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium284g00008 | - | - | vun:114196181 | 408.297 |