Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium284g00007 TGGATTGTCATTTCTAAAGTGCTACATATTTTGGTGTTGCAACCTAGGTATTTTGTCGCAGATAATGTGCTTGATGAAGTCACTTTTGGTTGGCCAAGGCAAAAGGGTAACCATCACCTCAGGGAGAATCTTACTCTAGGGCTACAAAGGGCAATTAACTGGGTTGGATTAAGTGGGATATCATTGGATAAAAATCCTCACTCCCTTAGTGGTGGTTACAAACGCCGTCTTGCCTTGGCAATACAATTAGTGCAAACCCCTGATCTATTGATATTGGATGAACCTCTTGCTGGACTCGATTGGAAAGCACGTGCTGATGTTGTGAAGCTGTTGAAGCATTTAAAAAAGGAGTTAACTGTGCTAGTTGTTAGTCATGATTTGAGAGAATTTGCGAATCTAGTTGATCGATCATGGAGAATGGAAATGGGTGGAAACCTTAAAGAAGAATTTCTACCATTGTAA 462 0.4048 WIVISKVLHILVLQPRYFVADNVLDEVTFGWPRQKGNHHLRENLTLGLQRAINWVGLSGISLDKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLREFANLVDRSWRMEMGGNLKEEFLPL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium284g00007 153 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 144 IPR027417 -
Vium284g00007 153 PANTHER HEAVY METAL TRANSPORTER 16 150 - -
Vium284g00007 153 Gene3D - 8 150 IPR027417 -
Vium284g00007 153 Pfam ABC transporter 12 97 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium284g00007 Vium-Chr284 97816 105286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium284g00007 69 132 Calmodulin-binding Proteins AT2G36910 35.938 8.73e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium284g00007 - - vum:124833238 298.13