Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2847g00001 AACCAAATACCCGAGCTCACATTCTTCCACGTAAATTCCAACGGCTTCGCCGGCTCTGTCCCCAGCGATGTCATCAATTTCCCTTACTTCTTCGAGCTCGACCTCAGTAACAACAAAGTCAAAGGCCAGTTTCCCCTCGACGCCATTAAGTCAAACCAACTGGTTTTCCTCGACCTCCGCTTCAACGAACTCACCGGCCCGATTCCCTTCCAACTCTTCCAGAAGGATCTCGACGTCATCTTCATCAACAACAACCATTTCACACAGTACCTCCCCCAGAATTTCGGCTCCACGCCGGCCCGCTACCTCACTTTCGCCAACAACAACCTCACCGGCCCGATTCCCAAGAGCGTCGGTTACGCACCCAACCTCACCGAAGTTCTCTTCCTCGGGAACCATTTCGACGGCTGCTTGCCCATTGAAATCGGAAACCTTAAAAAAGCTATCGTCTTTGATGTGAGTAAGAATTCTCTAACCGGCCCAATCCCTCTCTCTTTCGGGTGCTTGAAGAGCATTCAGTATCTGAATTTGGCGAACAACAAATTCTACGGCTGTGTTCCCGACAACCTTTGTCAAATTCCTTCTCTCCGCAACAATGGGAATCTCTCCTTGGCCAACAATTACTTCAACGAGCTTGGCCCCTCCTGCTGGAGTTTGATCAAGTCCAAGGTTTTGGATGTCTCAAATAATTGCATCCATGGGCTGCCAAACCAAAGATCACCCACCGAATGCTATTACTTTTACAAGACGAAGAAGACGTGTCCGAATCCGAGTTCTTTCTATACAGTGCCGTGTAAATCGCACTGGGGAAAACCCAGTTCCGAAACCAATGTTCCAACCTCTGCACCGGTGACTTACAAAGCTCTTAAACCGCATCGTTTGAGATTATGA 891 0.4893 NQIPELTFFHVNSNGFAGSVPSDVINFPYFFELDLSNNKVKGQFPLDAIKSNQLVFLDLRFNELTGPIPFQLFQKDLDVIFINNNHFTQYLPQNFGSTPARYLTFANNNLTGPIPKSVGYAPNLTEVLFLGNHFDGCLPIEIGNLKKAIVFDVSKNSLTGPIPLSFGCLKSIQYLNLANNKFYGCVPDNLCQIPSLRNNGNLSLANNYFNELGPSCWSLIKSKVLDVSNNCIHGLPNQRSPTECYYFYKTKKTCPNPSSFYTVPCKSHWGKPSSETNVPTSAPVTYKALKPHRLRL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2847g00001 296 Gene3D Ribonuclease Inhibitor 1 248 IPR032675 -
Vium2847g00001 296 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 2 274 - -
Vium2847g00001 296 FunFam Leucine-rich repeat receptor protein kinase EMS1 91 189 - -
Vium2847g00001 296 SUPERFAMILY L domain-like 3 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2847g00001 Vium-Chr2847 3453 4619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2847g00001 3 247 Leucine-rich Repeat extension Gene Families AT3G24480 43.673 2.04e-62 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2847g00001 - - vum:124832086 623.624