Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium283g00025 ATGGGCTTTCGTTTACCCGGTATCAGAAGGACTTCATCTGGCAGAAATCAAGCATCTTCAAAAGTGTTGGATGCGCCAAAGGGATACCTTGCAGTCTATGTGGGAGAGAATATGAAACGATTTGTGATTCCTGTATCACACCTGAACCAACCTTTATTCCAAGACTTGTTGAGTCAAGCTGAGGAAGAATTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAATATGTCTTCCAACATATTACTTCTTGTTTGAATGGACAATAG 279 0.4229 MGFRLPGIRRTSSGRNQASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEYVFQHITSCLNGQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium283g00025 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 89 IPR003676 GO:0009733
Vium283g00025 92 Pfam Auxin responsive protein 11 89 IPR003676 GO:0009733
Vium283g00025 92 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium283g00025 Vium-Chr283 279312 279695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium283g00025 24 91 Calmodulin-binding Proteins AT3G43120 51.471 3.73e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium283g00025 - K14488 gmx:100820621 164.081