Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium283g00001 ATGGGTTTTCGTTTACCTGGTATCAGAAAGGCGTCTCTTCGAGCAATCCAAGCATCTTCAAAAGTTGTGGATGTGCCAAAGGGTTACATTGCAGTCTATGTTGGAGATCAAAGGAAGCGGTTTATGATCCCTGTGTCATACTTGAACCAACCTTCATTTCAAGATCTGTTGAGTCAAGCTGAGGATGAATTTGGTTATGACCATCCAACCGGTGGTCTCACAATTCCTTGTGGAGAAGATGTGTTCTCAGATATCACTTCTCGCTTCGATAGATGCTAA 279 0.4301 MGFRLPGIRKASLRAIQASSKVVDVPKGYIAVYVGDQRKRFMIPVSYLNQPSFQDLLSQAEDEFGYDHPTGGLTIPCGEDVFSDITSRFDRC 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium283g00001 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 14 88 IPR003676 GO:0009733
Vium283g00001 92 Pfam Auxin responsive protein 19 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium283g00001 Vium-Chr283 15635 16108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium283g00001 22 92 Calmodulin-binding Proteins AT4G34750 45.070 5.90e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium283g00001 K14488 - gmx:100795597 154.066