Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2811g00012 ATGAGCGCCACCACCCCAGCCCTCTCCACCGTCACTGACGCCAATTTTCATTCTCGTTTTAAGCCATCATCTCGTTTTCCTCCTTTTCTTCATTTTCGCACTCTTCACTCCCAACAATTTTCTTCAGTCAGATGCCAATCGATTAATACCGATAAGAAGAAATCAAGTAGAAATGTCCTTGACAATGCAAGTAACCTCCTTACAGAATTTTTAAGTGGTGGAAGTATAGGGTCTATGCCCGTAGCTGAAGGGGCAGTAACAGATCTGTTTGATCGACCTCTCTTTTTCTCACTATATGATTGGTTCTTGGAGCATGGCGGAGTGTATAAACTTGCCTTTGGACCAAAAGCATTTGTTGTTGTATCAGATCCCATAGTTGCTAGACATATTCTGCGAGAAAATGCATTTTCTTATGACAAGGGAGTACTTGCTGATATCCTAGAACCAATAATGGGCAAAGGACTCATACCAGCAGACCTTGATACTTGGAAGCAAAGGAGAAGAGTCATTGCTCCGGCTTTCCATAACTCCTACTTGGAAGCTATGGTCAAAATATTCACAGCTTGTTCAGAAAGAACAATATTGAAGGTTAATAAGCTTCTCGAAGGAGACGGTTATGGTGGACCTAAGTCAGCTGAATTGGATCTTGAGGCAGAGTTTTCTAGTTTGGCTCTTGATATTATTGGTCTTGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAAAGAATCTCCTGTTATTAAGGCAGTCTACGGCACTCTTTTTGAAGCTGAACACAGATCAACTTTCTACATTCCATATTGGAAAATTCCATTGGCAAGGTGGATAGTCCCAAGGCAAAGAAAGTTTCATGATGACCTAAAGATCATCAATACATGTCTGGACGAACTTATTAAAAATGCAAAAGAAAGCCGACAGGAGACAGATGTTGAGAAATTACAGCAGAGAGATTACTTAAATTTGAAGGATGCAAGTCTTTTGCGTTTCTTGGTTGATATGCGAGGAGCTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTGTGGCTGGTCATGAAACAACGGCTGCAGTTCTTACGTGGGCAGTTTTCCTCCTAGCTCAAAATCCTAGCAAAATGAAAAAGGCTCAAGCAGAGGTAGATTTGGTGCTGGGTACAGAGAGGCCAACTTATGAATCACTTAAAAAACTGCAGTATATTAGATTGATTATTGTGGAGGCTCTCCGTTTATACCCACAACCACCTTTGCTGATTAGACGAACACTCAAATCTGACGTTTTACCAGGAGGGTACAAAGGTGATAAAGATGGTTATGCAATTCCTGCCGGCACCGATCTCTTCATTTCTGTATATAATCTCCACAGATCTCCATATTTTTGGGATCGCCCTCATGAGTTCGAACCCGAGAGATTTCTAGTGCAAAACAAGAATGAAGAAATTGAAGGATGGTCCGGTTTTGATCCATCTCGAAGTCCTGGAGCCTTGTATCCGAACGAGATTATATCGGATTTTGCCTTCTTGCCTTTTGGTGGCGGACCACGAAAATGTGTCGGAGACCAATTTGCTTTGATGGAATCCACTGTAGCGTTGACTATGCTGCTCCAGAATTTTGATGTGGAACTGAAGGGGACCCCTGAATCGGTGGAACTAGTTACTGGGGCAACCATCCATACCAAAAACGGACTCTGGTGCAAATTGAAGAAGAGATCTAATTTACATTGA 1731 0.42 MSATTPALSTVTDANFHSRFKPSSRFPPFLHFRTLHSQQFSSVRCQSINTDKKKSSRNVLDNASNLLTEFLSGGSIGSMPVAEGAVTDLFDRPLFFSLYDWFLEHGGVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPAFHNSYLEAMVKIFTACSERTILKVNKLLEGDGYGGPKSAELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKIPLARWIVPRQRKFHDDLKIINTCLDELIKNAKESRQETDVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLVAGHETTAAVLTWAVFLLAQNPSKMKKAQAEVDLVLGTERPTYESLKKLQYIRLIIVEALRLYPQPPLLIRRTLKSDVLPGGYKGDKDGYAIPAGTDLFISVYNLHRSPYFWDRPHEFEPERFLVQNKNEEIEGWSGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGATIHTKNGLWCKLKKRSNLH 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2811g00012 576 SUPERFAMILY Cytochrome P450 92 572 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2811g00012 576 Gene3D Cytochrome P450 80 576 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2811g00012 576 PANTHER CYTOCHROME P450 FAMILY 4 104 572 - -
Vium2811g00012 576 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 512 521 IPR017972 GO:0005506|GO:0016705
Vium2811g00012 576 Pfam Cytochrome P450 102 565 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2811g00012 576 PRINTS E-class P450 group I signature 342 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2811g00012 576 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2811g00012 576 PRINTS E-class P450 group I signature 519 542 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2811g00012 576 PRINTS E-class P450 group I signature 362 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2811g00012 576 PRINTS E-class P450 group I signature 509 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2811g00012 576 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2811g00012 576 PRINTS P450 superfamily signature 510 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2811g00012 576 PRINTS P450 superfamily signature 519 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2811g00012 576 PRINTS P450 superfamily signature 353 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2811g00012 576 CDD CYP97 96 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2811g00012 Vium-Chr2811 47207 56137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2811g00012 42 573 Cytochrome P450 AT4G15110 79.550 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2811g00012 K24543 - gmx:606504 1048.11