Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2794g00003 ATGGAGTTAAGTTGGGTTTGGATGATTGTTGCCACTTTCTTGGCATTTTACATTTTTGTAATGAAAATAGTGAGAAAGTTGAATGGGTGGTATTATGATAAGAAATTAGGAAACAAACATAGCTTATTGCCTCCTGGTGATATGGGATGGCCTCTTATTGGAAACATAATTCCCTTCATCAAACATTTCTTCTCTGATCATCCTGATTCATTCATCAACAACTTAGTCTCCAAATATGGAGAAAGTGGTATCTACAAAACTCATTTGCTGGGAAAACCAAGCATCATCGTATGCACACCTGAGATGTGTAAGAGAGTGTTGAATGATGATGAGAACTTCAAGCAAGGGTATCCAAAATCCACCAGTGAGCTGTTGAAAAACAAGGCTTTGAGCAATGTGTGCAGTGCAGAACACAAGCTTTTAAGAGAGTTGGTGAGTTCTGGGATTTTGGGTCAGAAAGTGTTGGCAACGAACCTAGAAATTGTGGAGAATATAGTGATTAATTCATTGGATGAGTTATCCAGAATGAAACAACCCCTTCAGGTTTTCAAAGAGATGGAAAAGATTTCCTTTGAAACCATTGTTCACATCTTGATGGGTTCTCACACTAATTCCAACAACATTGCAAAGTTGAGAGATTTGTTTCACCAATTCTCCAAATGCAATCCTATATATTCTCTTCCCATCAACTTTCCTGGTTTTGCTTTCCATCAAGGACTCAAGGTAAGAAAGAAGTTGTTGAAGGTAATTGAATCGATAGTGGGTGAAAGGAGGTCAATGATGAAAATGGTTAAAAATGGAGATAATAAGAAAGATCTGATTGAGCTTGTTTTGGAAGCCAAAGGGGAAAATGGTGAGGAATTGAAGGACGAAGATGTTGCAGATATGTTGTTAATGCTTCTCTTTGCTGGTCACGAAACCACTGCAGTGGCTTTCACTTCCTCAATTTTATATCTTACAAGACATCCACTTCTGTTTGCAAAAGCTAAGGAAGAGCAAGAAGAAATTGTGAAGGCAAGACCATCATCTCAGAAACAATTAAGTCACAAGGAAATTAAGAAAATGATTTATCTTTCCCAGGTAATGAATGAAACCTTACGTCGTACCAGTATTGCATTTTCTGTTTTTCGTGAGGCAACTAAAGACGTCAATATCAATGGTTATATCATACCAAAAGGGTGGAGAGTTCTAGTTTGGTTAAGAGCTATTCATATGAATCCTAAATATTATCCAAATCCAGAAGAATTTAATCCATCAAGATGGGATGAAAACAATGCTAGGGCAGCAACCTTCCTTCCTTTTGGAGCAGGAACAAGGCTTTGTCCAGGAAATAACATTTTCAAATACGAAATTTCCATATTTTTACACTATTTTCTACTAAATTACAAGTAA 1392 0.3685 MELSWVWMIVATFLAFYIFVMKIVRKLNGWYYDKKLGNKHSLLPPGDMGWPLIGNIIPFIKHFFSDHPDSFINNLVSKYGESGIYKTHLLGKPSIIVCTPEMCKRVLNDDENFKQGYPKSTSELLKNKALSNVCSAEHKLLRELVSSGILGQKVLATNLEIVENIVINSLDELSRMKQPLQVFKEMEKISFETIVHILMGSHTNSNNIAKLRDLFHQFSKCNPIYSLPINFPGFAFHQGLKVRKKLLKVIESIVGERRSMMKMVKNGDNKKDLIELVLEAKGENGEELKDEDVADMLLMLLFAGHETTAVAFTSSILYLTRHPLLFAKAKEEQEEIVKARPSSQKQLSHKEIKKMIYLSQVMNETLRRTSIAFSVFREATKDVNINGYIIPKGWRVLVWLRAIHMNPKYYPNPEEFNPSRWDENNARAATFLPFGAGTRLCPGNNIFKYEISIFLHYFLLNYK 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2794g00003 463 PANTHER CYTOCHROME P450 26 40 462 - -
Vium2794g00003 463 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2794g00003 463 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2794g00003 463 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2794g00003 463 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2794g00003 463 SUPERFAMILY Cytochrome P450 43 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2794g00003 463 Pfam Cytochrome P450 44 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2794g00003 463 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2794g00003 463 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2794g00003 463 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2794g00003 463 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2794g00003 463 PRINTS E-class P450 group I signature 441 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2794g00003 463 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vium2794g00003 463 Gene3D Cytochrome P450 34 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2794g00003 Vium-Chr2794 60490 64389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2794g00003 18 463 Cytochrome P450 AT2G32440 43.304 6.67e-141 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2794g00003 K04123 K17875 vra:106773832 852.432