Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2783g00004 ATGGCTGCAACTCAGGCTAATGATCCTAGAAGCATAGTTTCTATTTCAAAGGTTGTGTCTGTGAATCCAAAACTCGTGCAACCTCAGAGGGTTTTGCCTCTTTCAAATTTGGACAGGCAGTGTCCACACCTCATGCACTTGGTGTTCTTCTACAATAACCTGCCTCACCAGAGGTTGAAGGACTTGTCCCTCAATTCAGTGTTCTGCAGCTTGAAATCTGGCTTGGAAGATACCTTGGCTCTGTGGTATCCTGCTGCAGGTAGGCTTTGGCCGAATCAAAGTGATGGCAAGCTCAACCTGTGGTGCAACAACCATGGTGCAGTTCTTGCAGAGGCTGAAACCTCTGCTAAAATCTCACAACTTGGAAACCTCTCTGAGTACAATGAATTCTTTGAGAAGCTGGTTTATAAGCCAGCTTTTGATGGGAATTTCTCAAATATGCCGCTGATTGTTGCTCAGGTCACTAAATTTGGTTGTGGAGGGTATTCAATTGGTATTGGAACAAGCCACTCTTTGTTCGATGGGCCAGCAACCTATGAATTCTTGCGTGCATGGGCTTCAAATTCAGAAATTGTGAAAGGAAGAAGCAGATCTGATGAGGTTCCAAAGCCAGTGCATGAGAGAGGCATACTTCTGAGCGGTACTCTTGAAGCAGCAAGAGAGACTGGAAATTTTCCTTCAGACACAAGTTCAAATTCTAAAGAAGAAAGGGCCATGGCAGTAGATCACTTATATCATCTTATAATGCAAACAGCTTGTGCACAAAAGGGTTTTCCTCTGCAAATTGGAACAGCCTCGAATTCAAAGAAGTGTGTTCTTAAAACGTATCATGTTTCAGGTGCAATGACAGAAAACTTGAAAAGGAAACACTTCCCCATGCAAAGAGGTTCATTTCCTTTCTCAACCTTTGAGGTTCTTGCAGCTCACCTTTGGAAGGCAAGGAGCAAAGCTTTAGGGGTGAAAAAGGAAAAACAAGTATGCCTCCAATTTGCAGTGGACATAAGGAACAAGACGAGACCACCATTGCCAAAGTGTTTCAGTGGAAATGCATATGTTCTTGCATCGATCATGATGCCAATGGGAGAACTGGAAAATGCAAGCCATGAAAGCATCATTGAGAAAATAAGAGAGGCGAAGAACAGAGTGAACCACGATTACGTGAGAAGCTACGTTGAAGCATTAGAAGGAGCAGAACAAGGTTCTTCTCTTCCTCCACTTAAGGAGCTCACTCTGGTTTCTGATTGGACAAGAATGCCTTTTCACAACATTCAGTTCTTCCATGGAAAACCAACCTATGCATCCCCTCTTGCCACTCCTATCCCACAGGTCGCTTACTTCATGCAAAGCCCTACTGACAACAATGCCGTCGACGTCAGAATTGGCTTGGAAGCTGAACATATAAGTGCTTTTAATCACTGCTTTCTAACCATGGCCTCCTGA 1440 0.4389 MAATQANDPRSIVSISKVVSVNPKLVQPQRVLPLSNLDRQCPHLMHLVFFYNNLPHQRLKDLSLNSVFCSLKSGLEDTLALWYPAAGRLWPNQSDGKLNLWCNNHGAVLAEAETSAKISQLGNLSEYNEFFEKLVYKPAFDGNFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYEFLRAWASNSEIVKGRSRSDEVPKPVHERGILLSGTLEAARETGNFPSDTSSNSKEERAMAVDHLYHLIMQTACAQKGFPLQIGTASNSKKCVLKTYHVSGAMTENLKRKHFPMQRGSFPFSTFEVLAAHLWKARSKALGVKKEKQVCLQFAVDIRNKTRPPLPKCFSGNAYVLASIMMPMGELENASHESIIEKIREAKNRVNHDYVRSYVEALEGAEQGSSLPPLKELTLVSDWTRMPFHNIQFFHGKPTYASPLATPIPQVAYFMQSPTDNNAVDVRIGLEAEHISAFNHCFLTMAS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2783g00004 479 Gene3D - 256 476 IPR023213 -
Vium2783g00004 479 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 442 - -
Vium2783g00004 479 Gene3D - 10 219 IPR023213 -
Vium2783g00004 479 Pfam Transferase family 17 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2783g00004 Vium-Chr2783 82750 86727 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2783g00004 13 470 Monolignol Biosynthesis Gene Families AT5G48930 25.641 8.82e-38 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2783g00004 K15400 - gmx:100803347 788.489