Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2773g00003 ATGAATAAGTACACTATATCAAACCCTAGCCCCCAAACCTCAGCTTCTCAGTCGCCGTTTCCTCCGTTTAGGGATTCTTCTTCCTTTCTCCAAACTGCAACAATGGTTGCCGCCAAGAAGACCAAGAAGACCCATGAGAGCATCAACAACAGGCTCGCTCTTGTCATGAAGAGTGGCAAGTACACCCTTGGTTACAAGACCGTTCTCAAATCGCTCAGGAGCTCCAAAGGAAAACTGATTATCATTGCCAACAACTGCCCTCCTTTGAGGAAGTCAGAGATAGAGTACTATGCTATGTTGGCAAAGGTCGGAGTTCATCACTACAATGGGAACAACGTTGATTTGGGAACTGCATGCGGTAAATATTACAGAGTGTGCTGTCTCAGCATTATTGATCCAGGTGATTCTGATATCATCAAGACACTGCCTGGTGAACTATAA 441 0.4512 MNKYTISNPSPQTSASQSPFPPFRDSSSFLQTATMVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGEL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2773g00003 146 SUPERFAMILY L30e-like 47 140 IPR029064 -
Vium2773g00003 146 FunFam 60S ribosomal protein L30 36 142 - -
Vium2773g00003 146 ProSitePatterns Ribosomal protein L30e signature 2. 114 134 IPR022991 -
Vium2773g00003 146 MobiDBLite consensus disorder prediction 1 22 - -
Vium2773g00003 146 Gene3D - 36 142 IPR029064 -
Vium2773g00003 146 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 47 139 IPR004038 -
Vium2773g00003 146 PANTHER RIBOSOMAL PROTEIN L30 35 143 IPR039109 GO:0003723
Vium2773g00003 146 Hamap 50S ribosomal protein L30e [rpl30e]. 46 143 IPR000231 GO:0003723|GO:0003735|GO:0022625
Vium2773g00003 146 ProSitePatterns Ribosomal protein L30e signature 1. 58 82 IPR022991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2773g00003 Vium-Chr2773 10640 12401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2773g00003 35 145 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 87.387 5.22e-71 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2773g00003 K02908 - gmx:100806260 228.024