Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2767g00002 ATGGCTAAAGACGAGTTGAAGCTTTTGGGTGGGTGGTTCAGCCCTTATGCCTTAAGGGTGCAGATTGCCCTTAACCTGAAGGGTGTAGATTACGAGGTTATTGAAGAGACCTTGAATCCCAAAAGTGAACTTCTTCTTAAGTCCAATCCTGTGCACAAGAAAATTCCAGTTCTTCTCCATGCAGATAAACCCATATGCGAATCTGGAATCATAGTCGAATACATCGATGAAGTTTGGACCCATGCTCCCTCCATCCTTCCACAAAATGCCTATGATCGAGCTAATGCCAGATTTTGGGTTGCTTACATCGATGACAAGTGGCTTCCGCCCATGATAAATATTCTGATAGCTGAAGATGATGAGGCAAAAAAGCCACACTTTGAGATAGTAGAGGAAGCAGCAGGGAGGTTGGAAGAAGTGCTAAAGAAGAGCAGTAGTGAAGGGAAGGCATTTTTTGGAGGAGATACGATTGGATTCATTGATATTGGTTTTGGTAGCTTTCTGAGTTGGACGAGAGTGATTGAGAAGATAAATGGAAGAAAATTGCTGGATGAAACCAAGCACCCAAGTTTGGTACAGTGGGCTGAAACATTTGCTGCTCATCCTGCTGTCAATGGCTTTCTACCAGAAATTGACAAGCTTATTGAATTTTCCAAGATTTTAAAGCTAAAGTTAGCTGCTGCAAAGTAA 690 0.4232 MAKDELKLLGGWFSPYALRVQIALNLKGVDYEVIEETLNPKSELLLKSNPVHKKIPVLLHADKPICESGIIVEYIDEVWTHAPSILPQNAYDRANARFWVAYIDDKWLPPMINILIAEDDEAKKPHFEIVEEAAGRLEEVLKKSSSEGKAFFGGDTIGFIDIGFGSFLSWTRVIEKINGRKLLDETKHPSLVQWAETFAAHPAVNGFLPEIDKLIEFSKILKLKLAAAK 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2767g00002 229 FunFam Glutathione S-transferase U9 86 228 - -
Vium2767g00002 229 SFLD Main.3: Omega- and Tau-like 1 227 IPR045073 -
Vium2767g00002 229 Pfam Glutathione S-transferase, C-terminal domain 99 202 IPR004046 -
Vium2767g00002 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 223 IPR010987 -
Vium2767g00002 229 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 215 IPR045073 -
Vium2767g00002 229 Gene3D - 86 229 - -
Vium2767g00002 229 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Vium2767g00002 229 SFLD Main (cytGST) 1 227 - -
Vium2767g00002 229 SUPERFAMILY GST C-terminal domain-like 77 221 IPR036282 -
Vium2767g00002 229 FunFam Glutathione S-transferase GSTU6 1 86 - -
Vium2767g00002 229 CDD GST_N_Tau 6 79 - -
Vium2767g00002 229 Gene3D Glutaredoxin 1 85 - -
Vium2767g00002 229 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Vium2767g00002 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vium2767g00002 229 CDD GST_C_Tau 90 221 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2767g00002 Vium-Chr2767 32133 33223 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2767g00002 1 221 Glutathione S-transferase Gene Family AT1G10360 56.757 4.63e-85 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2767g00002 K00799 - gmx:547576 341.658